Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2408 CATTTCTATAAACAGTCATCAAAATCTTCTCTTGTTGCATCCATGGCGTTGAGGTATAGGAAAAACGATGAGATAGTAAAAGTTGATTCTGAAGAACGCTCCGCTATGGCGAAAACTTACAAACGACGGTGGAAAATGGCCTTTGCCGCCATTTGTTTCACCAGAGCTCTCATTTCTCTCTCGAGAAAAGTAGCCGGACGCAAGTCCGACGGTCTCTTGCGCTCGCTTTCGTATGTTACTGTTGATGTGCAGCTGCATGATCATGACGACGACGGCGAGCGGCCGTGCATGGAGGTGTTTTCTCGCGTGGATCGGAAAGTTCTAAGTGAGATGGTGCGGGAGAAGAATTATGAGTGTTTGAATCGATTTGGAGGTGTTGAAGGATTGAGTGATCTTCTCCAAACTAACACCAATAGTGGAATCCCTGAAGACGATCTAATTTTCAGAGAAAATGCTTTTGGAACAAATACTTACTCGAAGCTCCATGGCAGAAGCTTCCTGAGTTTCGTGATGGAAGCGTTCAACGATACAACTATTATCATTCTTTTGATCTGTGCAGCGCTTTCTTTAGGATTTGGAATCAAACAACGCGGTTCGGACGATGGATGGTACGACGGCGGCAGCATTGTCATCGCCATATTTCTGGTGGTTGTCGTTTCCGCCGCGAGCAACTTCAAGCAATCGAGACAGTTCGAGAAGCTTTCAAACGAGAGAGACGACATCAAAATTGAGGTCACGAGAGCCGGTCGACGCAAACCGATATCGATATTCGAACTCCTCGTCGGAGACATTGTGCATTTGAAGATTGGAGATCAGATACCGGCGGATGGAGTGTTCCTCGAGGGACATTCGCTGAAGATCGACGAATCGAGCATGACCGGAGAGAGCGAACACGTTGAAGTAAACCATGAAATTAATCCGTTTTTGCTGTCAGGAACCAAAGTGAGCGATGGATTTGGTTTGATGATGGTGACTTCTGTTGGAATGAACACAGCCTGGGGAGAAATGATGAGTTCAATTAGACAGGAAGTTAATGAAATTACTCCATTGCAAGATCGCTTGAACAAGATGACCGCCGTGATCGGGAAGATCGGGCTGACCGTCGCCGTGCTCGTGCTTCTTGTTCTGCTTATTCGCTATTTCACCCGCAGCACCGGCGAGTTCAATGGAAGCAAGACGAGGTTTAATGAAGTCATGAATGCAGTTCTCGGCATGGTTGCGGTGGCCGTTACGATCGTCGTCGTGGCGATCCCGGAAGGTTTGCCTCTTGCTGTTACTTTAACTTTAGCTTATTCCATGAAAAAAATGATGTCAGATAATGCAATGGTTAGGAAACTCTCTGCTTGTGAAACAATGGGATCAGCGACTACAATTTGTACAGATAAAACTGGTACTCTTACTTTGAATGAGATGAAAGTTACAGAGTTCTGGATTGGGGAAGAAGATGAAATAAACTCAAGGATTGGGAGTAAGGTTATTGTTGAATTACTGCACCAAGCAGTTGGATTGAATACAACTGGTAGTGTTCAAAGGCCAGCTTCTTCTTCATTGCCTCTAGAAATATTCGGGAGTCCGACCGAGAAAGCGATACTTTCTTGGGCGGTATTGGATTTGGATTTGAACTTGGATGAACTGAAGAAACAACATGAGATAATCCAAGTGGAGACTTTCAGTTCAGAGAAAAAGAGAAGCGGCGTTTCGACGAGACGATACGGCGAGAGGCTTATTAATACACATTGGAAAGGAGCAGCGGAGATGATATTGGCTATGTGTTCATATTATTATGAGAAACAAGGGACAATTACAGCCATCGATGGCGAAACAAGAAGACGGTTGATTGCAATAATCACAACTATGGCAGAAAAAAGAATAGTCGGTTTGAAGGATCCTTGCAGGCCGGGAGTTAGAGAAGCTGTAGAATCATGTAAAGCTGCAGGAGTGAACATCAAAATGGTGACAGGTGATAATCTGCACACAGCAACAGCGATAGCAATTGAATGCGAAATACTAAATCTCGACGACGATACAAACGACGGCGGAGTTGTGGTCGAGGGCGTAACATTTAGAAACTACACACCTGAGGAGAGACTAGAAAAGATTGGAAAGATCAAAGTGATGGCTAGATCTTCCCCATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATCAAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTCCATGAGGCAGACATTGGTCTTTCCATGGGGATTCAAGGAACCGAAGTGGCAAAGGAGAGCTCAGACATCGTCATCTTGGACGACAACTTCACGTCGGTCGTCACCGTCTTGAAATGGGGAAGATGTGTTTACAACAACATTCAAAAGTTCATTCAATTTCAGCTCACTGTGAATGTTGCAGCATTGGTAGTGAACTTCATTGCTGCTGTGTCTTCTGGTAAAGTCCCTCTAACAGCAGTTCAGCTACTATGGGTGAATCTCATAATGGACACCATGGGAGCTTTAGCCTTAGCCACCGAACTACCGACCAACGATCTCATGAAGAAAACGCCGGTCGGTCGAACCGAGCCGTTGGTGACGAAAGTCATGTGGAGGAACCTCATTGCTCAGGCTGTGTATCAGGTGACAGTCTTGCTGGTTTTGGAATTTAAAGGAAGTTCAATCTTCAATGTGAATGAAAAGGTTAAGAGCACACTCATCTTCAACACTTTTGTTATGTGCCAAATCTTCAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATATATTTGAAGGGCTACACAAAAGCAAGCTGTTTTTGGCAATAATTATGATAACTTTGGCTTTTCAAGTGGTAATGGTGGAGCTTTTGGGAAGATTTGCCAATACTGAGAGGTTGAATTGGAGCCAGTGGGGAGCATGTATTGGCATTGCAGCTTTGTCTTGGCCAATTGGATGGCTTTCCAAGTTAATACCAGTTTAA 2967 44.62 HFYKQSSKSSLVASMALRYRKNDEIVKVDSEERSAMAKTYKRRWKMAFAAICFTRALISLSRKVAGRKSDGLLRSLSYVTVDVQLHDHDDDGERPCMEVFSRVDRKVLSEMVREKNYECLNRFGGVEGLSDLLQTNTNSGIPEDDLIFRENAFGTNTYSKLHGRSFLSFVMEAFNDTTIIILLICAALSLGFGIKQRGSDDGWYDGGSIVIAIFLVVVVSAASNFKQSRQFEKLSNERDDIKIEVTRAGRRKPISIFELLVGDIVHLKIGDQIPADGVFLEGHSLKIDESSMTGESEHVEVNHEINPFLLSGTKVSDGFGLMMVTSVGMNTAWGEMMSSIRQEVNEITPLQDRLNKMTAVIGKIGLTVAVLVLLVLLIRYFTRSTGEFNGSKTRFNEVMNAVLGMVAVAVTIVVVAIPEGLPLAVTLTLAYSMKKMMSDNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTEFWIGEEDEINSRIGSKVIVELLHQAVGLNTTGSVQRPASSSLPLEIFGSPTEKAILSWAVLDLDLNLDELKKQHEIIQVETFSSEKKRSGVSTRRYGERLINTHWKGAAEMILAMCSYYYEKQGTITAIDGETRRRLIAIITTMAEKRIVGLKDPCRPGVREAVESCKAAGVNIKMVTGDNLHTATAIAIECEILNLDDDTNDGGVVVEGVTFRNYTPEERLEKIGKIKVMARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVVNFIAAVSSGKVPLTAVQLLWVNLIMDTMGALALATELPTNDLMKKTPVGRTEPLVTKVMWRNLIAQAVYQVTVLLVLEFKGSSIFNVNEKVKSTLIFNTFVMCQIFNEFNARKLEKKNIFEGLHKSKLFLAIIMITLAFQVVMVELLGRFANTERLNWSQWGACIGIAALSWPIGWLSKLIPV 988
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 64608487 64614717 - Hsped.08g24080.1 Hepe08g2408 578380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2408 988 SFLD C1.7: P-type atpase like 441 784 - -
Hepe08g2408 988 SMART Cation_ATPase_N_a_2 122 194 IPR004014 -
Hepe08g2408 988 SUPERFAMILY Calcium ATPase, transduction domain A 243 339 IPR008250 -
Hepe08g2408 988 Gene3D - 507 624 IPR023299 GO:0000166(InterPro)
Hepe08g2408 988 FunFam Calcium-transporting ATPase 618 776 - -
Hepe08g2408 988 Gene3D - 127 320 - -
Hepe08g2408 988 PRINTS P-type cation-transporting ATPase superfamily signature 755 767 - -
Hepe08g2408 988 PRINTS P-type cation-transporting ATPase superfamily signature 288 302 - -
Hepe08g2408 988 PRINTS P-type cation-transporting ATPase superfamily signature 645 655 - -
Hepe08g2408 988 PRINTS P-type cation-transporting ATPase superfamily signature 459 473 - -
Hepe08g2408 988 PRINTS P-type cation-transporting ATPase superfamily signature 623 634 - -
Hepe08g2408 988 PRINTS P-type cation-transporting ATPase superfamily signature 731 750 - -
Hepe08g2408 988 NCBIfam HAD-IC family P-type ATPase 702 813 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2408 988 NCBIfam HAD-IC family P-type ATPase 403 492 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2408 988 FunFam Calcium-transporting ATPase 748 988 - -
Hepe08g2408 988 FunFam Calcium-transporting ATPase 219 341 - -
Hepe08g2408 988 Pfam Cation transporter/ATPase, N-terminus 124 189 IPR004014 -
Hepe08g2408 988 PANTHER CATION TRANSPORTING ATPASE 106 988 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Hepe08g2408 988 Pfam haloacid dehalogenase-like hydrolase 457 745 - -
Hepe08g2408 988 SUPERFAMILY HAD-like 457 835 IPR036412 -
Hepe08g2408 988 SFLD p-type atpase 441 784 IPR044492 -
Hepe08g2408 988 Pfam E1-E2 ATPase 242 437 - -
Hepe08g2408 988 SUPERFAMILY Calcium ATPase, transmembrane domain M 124 987 IPR023298 -
Hepe08g2408 988 Gene3D - 777 983 - -
Hepe08g2408 988 ProSitePatterns E1-E2 ATPases phosphorylation site. 461 467 IPR018303 -
Hepe08g2408 988 Gene3D - 631 776 IPR023214 -
Hepe08g2408 988 Pfam Cation transporting ATPase, C-terminus 816 986 IPR006068 -
Hepe08g2408 988 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 465 635 IPR023299 GO:0000166(InterPro)
Hepe08g2408 988 Gene3D - 321 480 - -
Hepe08g2408 988 PRINTS H+-transporting ATPase (proton pump) signature 731 747 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2408 988 PRINTS H+-transporting ATPase (proton pump) signature 763 788 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g2038 Hepe-Chr3:77823443 Hepe08g2408 Hepe-Chr8:64608487 0.0 dispersed
Hepe08g2077 Hepe-Chr8:58441498 Hepe08g2408 Hepe-Chr8:64608487 0.0 dispersed
Hepe08g2408 Hepe-Chr8:64608487 Hepe10g1192 Hepe-Chr10:46606824 3.33e-94 dispersed
Hepe08g2408 Hepe-Chr8:64608487 Hepe05g0808 Hepe-Chr5:20694183 3.27e-268 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2408 K01537 - csv:101218531 1532.69