Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2445 ATGGCGAACCGGTGGTGGACCTCCAGCCAGATGGGTCTTCCCGGAGTCGATCATACGTCGACAAGCTCCACCGTGATGAGAAAACCAGATCTGGGGATCTCCATGAATGATAACGGCGGACCCATTAACAGCGGTGGTGGTGATGACGATGACGATCACGATAACGGTGGTGATGAGCCTAAAGAAGGAGCTGTCGATATTCCGACACGCCGCCCCCGCGGCCGACCGCCCGGCTCCAAGAACAAGCCCAAGCCACCCATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGATATTGCTGAAAGCGTTGCTCAATTCGCCCGACGGCGGCAAAGAGTTTTGACCCTCCACGGCCGGTTTGAGATTCTTTCTTTGACTGGAACTTTCCTCCCCGGACCAGCCCCGCCCGGCTCCACAGGACTAACGATCTACTTGGCTGGTGGCCAAGGGCAAGTGGTGGGTGGCAGCGTTGTCGGGCCACTCACCGCTGCCGGCCCGGTGATGGTGATTGCTGCAACGTTTTCCAACGCGACATACGAACGATTACCGTTGGAGGAGGAGGAGGAAGGTGGCGGAGGAGCACAAGCGCACGCATCGGCAGGCGGTGGCGCAGGGGACGATTCACCGCAAGGCATCGGTGGCGGAGTGGGAGATCCATCAGCCATGCCACCGTTGTACAATTTACCGCCGAATTTGCTACCGAACGGGGGCGGCGGGCAGATGAACCAGGAGGCTTATTCTTGGGCTCACGGCGGCCGGCCGTCGTTTTAA 804 58.08 MANRWWTSSQMGLPGVDHTSTSSTVMRKPDLGISMNDNGGPINSGGGDDDDDHDNGGDEPKEGAVDIPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAQFARRRQRVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGGAQAHASAGGGAGDDSPQGIGGGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPSF 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 65405116 65410533 + Hsped.08g24450.1 Hepe08g2445 578417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2445 267 ProSiteProfiles PPC domain profile profile. 65 208 IPR005175 -
Hepe08g2445 267 MobiDBLite consensus disorder prediction 195 267 - -
Hepe08g2445 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 186 IPR005175 -
Hepe08g2445 267 MobiDBLite consensus disorder prediction 1 29 - -
Hepe08g2445 267 CDD DUF296 98 157 IPR005175 -
Hepe08g2445 267 Gene3D - 120 202 - -
Hepe08g2445 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 124 265 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe08g2445 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 198 - -
Hepe08g2445 267 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1629 Hepe-Chr5:66159109 Hepe08g2445 Hepe-Chr8:65405116 2.58e-75 dispersed
Hepe06g1763 Hepe-Chr6:68737986 Hepe08g2445 Hepe-Chr8:65405116 1.96e-54 dispersed
Hepe08g2445 Hepe-Chr8:65405116 Hepe10g0420 Hepe-Chr10:4705638 8.90e-34 dispersed
Hepe08g2445 Hepe-Chr8:65405116 Hepe08g2448 Hepe-Chr8:65462238 2.60e-08 proximal
Hepe03g0262 Hepe-Chr3:3441073 Hepe08g2445 Hepe-Chr8:65405116 1.79e-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2445 - - - 0.0