Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2482 ATGGTATCAAAATCCACCACTCTTTTTTTCTTCACACTCTTAATTTCACAACTCCACAACTCCAAATCACAGCCATGGATCAAAGCTGGCTATTGGCTTTCCGGCAGTGAAAATTCTCCTGCATCTTCCATAAATTCACCTCTTTTTACTCATCTCTTTTGTGGGTTTGCAGAGTTCATAAATTCCACTTCCTATGAGCTTCAATTCTCCCCTTCTGATCTTCAAACTTTCTCAAATTTCACCACAATTGTCAAACAAAAAAACCCATCTCTCTCCACTCTTCTCTCAATTGGAGGTGGAAATGCAAATTATTCAATCATATCCTCAATGGTTAGCAATTCCACAAATAGAAAACCCTTCATTGATTCCACTATAAAAATTGCAAGATCCCATGGTTTTAATGGGCTGGATTTTTGTTGGGTTTCAGCTCAAACCAGTTCAGACATGTCAAACATGGGGAAACTCTTTCAAGAATGGCGACAAGCAGCAGAATTGGAAGCCAAAACCTCAAGAAAACAAGTGCTTATTTTGACAGCAGCTGTTCAATACACCCCAGATTTGGAATTTGGGTCTTTTCCTGTGGAATCCATAAGGAATAATTTGAATTGGGCAAATGTTTTGGCTTATGATTACTACATGCCAAGTTGGGCAAATTTCACAGCTCCTTCTGCAGCTTTGTATGATCCATTATTGGGGAGAGCAAATACAGACAGTGGAATTGGGAAATGGATTGAAGAAGGATTGCCTGCTGCTAATATTGTTTTGGCTTTGCCTTTTTATGGATATGCTTGGAGACTTCAAAATGTTGAGGATTTTGGTGTTGGGGCTGCAGCTATTGGGCCAGCCATTTCTAATGATGGGTCAATTAGTTATAAGGAGATTAAGGATTATATGAAGAGAAATGGGGTTAGTGTTAGTGATGTGAAGTTTAATGGAAGCTATGTGATGAGTTATTGTGTGGTGGGATCTACTTGGATTGGTTTTGATGATGCTGAGGTTGTTAAAATTAAGGTTGGTTATGTCAAGCAAAGGAGATTGCTTGGTTACTTTGTTTGGTTGGTGTCTTATGATGACAATTGGGAGCTCTCTTCTCTTGCAGCAAAAGAGTTTGGCAATGAGAAAGAGAACAAGGTATCGTTGCTGATAATCATCCCAAGTACAATTGGTGGAGTCATATTACTACTACTACTAGGACTTTTGTTGTCTAGAAGACTCAAATCCAAAGGAAGAAGATCAAGATTCAATGTAAAGAATAATAATCTGGTTGGTGGAGAAGATTTTAAGAACAATGCAGCTGATGATTTGCAAGCTTTTAGCTTTGGTGAGATTCAAAAGGCTACCAATAAGTTTGCTTTCGTGAATAAACTTGGACAAGGTGGTTATGGTCCTGTTTATAAGGGTGTATTACCAAATGGACAGGAGATAGCAGTGAAAAGGTTGTCAGAAACTTCAGCACAGGGTTTTGAAGAGTTTAAGAATGAAGTTTTGCTCACTGCAAGACTACAACATGTCAACCTTGTGAAAGTTCTTGGATTCTGTGTTGACACTCATGAACATATGTTGATTTATGAGTACATGCCTAACAAAAGCTTGGACTTCCACCTCTTTGGTCGTGGAAGAGCAAATTTGTTGAATTGGGCAAAAAGAGTAGAGATCATTGAAGGGGTAACTCAAGGACTTCTTTACCTACAAGAATACTCGAGATTGACAATAATTCACAGGGACTTGAAGCCTAGCAATATTTTGTTGGACGATGGCATGAAACCGAAAATCTCGGATTTTGGCATGGCTAGAATATTTACAAAAGATGAACTTGAAGCAAACACGAGTCGAATTGCGGGAACCCAAGGTTATGTTCCTCCGGAGTATATGAAGAAAGGACTTTATTCTACGAAATCAGATGTATTTAGCTTTGGAGTTCTTCTTCTTCAAATCATAAGTGGCAAGAAGACTACCAAGTTGTATGGAGTGCAAGAACAATCGAATCTTCTAGATTATGCATATGAGCTGTGGAAAGAGGGAAGAGGGATGGAATTTATGGATCAATCACTTGATGATTGTGATTCAAATTGCAAACTAACAAGATGCATGCAGATAGCTTTGCTTTGTGTCCAAGAAAATGCAGATGATAGGCCATCCATGTTGGAAATCTCTTCAATGTTTAAGAGTACAACTTCAGAGCTTATTACTCCACAAAGGCCTGCTTTCTCTACTAAACAAATTCAAGAAGATCAAACTGATCATAGCATTATGATTGAACAACAAACTTACTCGGTTTGTAGCGCAACAATAACAAATGTTGTAGCTCGATAA 2313 38.35 MVSKSTTLFFFTLLISQLHNSKSQPWIKAGYWLSGSENSPASSINSPLFTHLFCGFAEFINSTSYELQFSPSDLQTFSNFTTIVKQKNPSLSTLLSIGGGNANYSIISSMVSNSTNRKPFIDSTIKIARSHGFNGLDFCWVSAQTSSDMSNMGKLFQEWRQAAELEAKTSRKQVLILTAAVQYTPDLEFGSFPVESIRNNLNWANVLAYDYYMPSWANFTAPSAALYDPLLGRANTDSGIGKWIEEGLPAANIVLALPFYGYAWRLQNVEDFGVGAAAIGPAISNDGSISYKEIKDYMKRNGVSVSDVKFNGSYVMSYCVVGSTWIGFDDAEVVKIKVGYVKQRRLLGYFVWLVSYDDNWELSSLAAKEFGNEKENKVSLLIIIPSTIGGVILLLLLGLLLSRRLKSKGRRSRFNVKNNNLVGGEDFKNNAADDLQAFSFGEIQKATNKFAFVNKLGQGGYGPVYKGVLPNGQEIAVKRLSETSAQGFEEFKNEVLLTARLQHVNLVKVLGFCVDTHEHMLIYEYMPNKSLDFHLFGRGRANLLNWAKRVEIIEGVTQGLLYLQEYSRLTIIHRDLKPSNILLDDGMKPKISDFGMARIFTKDELEANTSRIAGTQGYVPPEYMKKGLYSTKSDVFSFGVLLLQIISGKKTTKLYGVQEQSNLLDYAYELWKEGRGMEFMDQSLDDCDSNCKLTRCMQIALLCVQENADDRPSMLEISSMFKSTTSELITPQRPAFSTKQIQEDQTDHSIMIEQQTYSVCSATITNVVAR 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 65909238 65919224 - Hsped.08g24820.1 Hepe08g2482 578454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2482 770 SMART 2g34 26 357 IPR011583 GO:0008061(InterPro)
Hepe08g2482 770 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 373 IPR001223 GO:0005975(InterPro)
Hepe08g2482 770 Gene3D Glycosidases 42 359 - -
Hepe08g2482 770 Gene3D Phosphorylase Kinase; domain 1 415 525 - -
Hepe08g2482 770 SMART serkin_6 450 721 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2482 770 SUPERFAMILY Protein kinase-like (PK-like) 433 754 IPR011009 -
Hepe08g2482 770 FunFam Class V chitinase CHIT5b 259 328 - -
Hepe08g2482 770 Pfam Glycosyl hydrolases family 18 30 357 IPR001223 GO:0005975(InterPro)
Hepe08g2482 770 Gene3D - 259 328 IPR029070 -
Hepe08g2482 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2482 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 526 729 - -
Hepe08g2482 770 Pfam Protein tyrosine and serine/threonine kinase 452 719 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2482 770 CDD STKc_IRAK 456 722 - -
Hepe08g2482 770 SUPERFAMILY (Trans)glycosidases 27 374 IPR017853 -
Hepe08g2482 770 CDD GH18_plant_chitinase_class_V 24 363 - -
Hepe08g2482 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 415 525 - -
Hepe08g2482 770 ProSiteProfiles Protein kinase domain profile. 450 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2482 770 Gene3D Transferase(Phosphotransferase) domain 1 526 744 - -
Hepe08g2482 770 SUPERFAMILY Chitinase insertion domain 260 328 IPR029070 -
Hepe08g2482 770 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 335 736 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0498 Hepe-Chr8:4359002 Hepe08g2482 Hepe-Chr8:65909238 4.51e-94 dispersed
Hepe08g0499 Hepe-Chr8:4373578 Hepe08g2482 Hepe-Chr8:65909238 4.16e-95 dispersed
Hepe08g2482 Hepe-Chr8:65909238 Hepe09g0600 Hepe-Chr9:5645213 1.19e-86 dispersed
Hepe08g2482 Hepe-Chr8:65909238 Hepe09g0598 Hepe-Chr9:5635167 1.68e-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73090 PF00704 Glyco_hydro_18 2.90E-65 CL0058 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2482 - - - 0.0