Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g2504 | ATGGCTTTTCTTGTTTTCTCTGTTTCCAATTTAGTTCTCACCATATTCGCATCTGTCATTACGGCATTGATCTGCCCCCAAGCAGCTGGCTCAGGTATACCAGAAGTAAAGGCTTATCTGAATGGCGTGGATGCCCCTGGAATATTATCGCCCCAAACACTGTTAGTGAAGATTATTGGCAGCATTTCTATTGTGTCATCATCTATGATCGTTGGAAAAGCTGGACCTATGGTACATACAGGGGCATGTGTTGCATCCTTGGTAGGTCAGGGGGGTTTCAAAATATTTGGTTTAACATGGAGATGGCTATACCATCTCGAGAATGATCGAGATAGGCGGGATCTTGTAACATGTGGAGCCGCTGCTGGAATAGCTGCTGCATTTCGTGCTCCTGTTGGTGGTGTGCTGTTTGCTTTTGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTTTGTGGCGATCGTTTTTCACAACTGCTATAGTTGCTGTGGTATTACGCTCACTGATTGACATTTGTTTAAATGGATTATGTGGATTATTTGGTAAAGGGGGACTTATAATATTTGATACCTACTCAGACTTTCCTACATACCACCTCGAGGATCTACCTCCTGTGCTTGTCCTTGCTTTTATTGGAGGCATACTTGGAAGCTTATATAATTTTCTTTTGAACAAAGTTCTTCGCGTTTACAATCTCATACACGAGAAAGGCATTGTTTACAAAATTTTACTGGCTTGCTCTGTCTCAATTTTCACATCCTGTCTTCTTTTTGGATTACCATGGTTCGCACCATGCCAACCTTGCCCATCAGGTGCTCGAGAAATTTGTCCTACGATAGGCCGATCTGGTAACTTCAAGAAGTTTCAGTGTGCTCCTGGTCACTACAATGATCTTGCAAGTCTCATATTTAACACCAATGATGATGCCATAAAAAATCTCTTTAGCAAGGACACAGACTCTGAGTTCCATTTCTCATCAATGCTCACATTTTTCATTACCTGTTTTTCCTTGAGCATTCTCAGTTATGGGACGGTTGCTCCTGTCGGCCTGTTTGTCCCTGTTATTGTGACTGGAGCTTCTTATGGTCGTTTTGTCGGAATGGTTGTCGGTCCATACACAAACCTCAGCCACGGCTTCTTTGCCATATTGGGTGCCGCTTCATTTCTCGGGGGTTCAATGCGGACAACAGTTTCTCTCTGTGTTATTATGCTTGAATTGACCAATAATTTGTTGTTGCTGCCTTTAGTAATGCTGGTTCTCCTTATTTCCAAGACTGTAGCTGATGCTTTCAACAGTAATATATATAACTTGATCATGAAAGCGAAAGGCTTTCCTTATCTAGAAGGCCATGTTGAGCCATACATGAGGCAGCTGACTGTTGCCGATGTGTTAACGAGTCCGCTTCAAGTATTGCATGGCATTGAGAAGGTTCGTAATGTAGTAGACATTCTCAAATGGACAAGTCATCATGGATTTCCTGTCGTTAACGAGCCTCCTTTCTCTGAATTTCCTGTTTTATATGGCCTAATTCTCAGAGCCCATCTTATTGTGTTGCTAAAGAAGAAAGCTTTCTTGCCCGTTCCAACACTAGGATCAGAAAGAAAGGATGCCTTTAAGCTATTCTCAACTGATGATTTTGCAAAGATGGGTTTGGGCGACGTTGATAGAATTGAAGGTGTACAATTGACCGACGAAGAGATGGAGATGTTCATTGATCTACATCCATTCGCTAATACTTCACCTTGTACCGTCTTGGAAACGATGTCATTAGCAAAGGCTCTTGAAATTTTTCGAGAAACTGGTTTAAGACACATGCTGGTGATACCCAAGGTCCCTGGGAGATCGCCCGTGGTTGGTGTATTGACTCGGCACGACTTCATGCCAGATTACATTCTGAGTTTGCATCCATTGCTAGAGAAGAGCAGATGGAAAAGGTTAAGAATCAAATTTCACCTGAAGAAAAAGTTCTTCTAG | 1974 | 42.5 | MAFLVFSVSNLVLTIFASVITALICPQAAGSGIPEVKAYLNGVDAPGILSPQTLLVKIIGSISIVSSSMIVGKAGPMVHTGACVASLVGQGGFKIFGLTWRWLYHLENDRDRRDLVTCGAAAGIAAAFRAPVGGVLFAFEEMASWWRSALLWRSFFTTAIVAVVLRSLIDICLNGLCGLFGKGGLIIFDTYSDFPTYHLEDLPPVLVLAFIGGILGSLYNFLLNKVLRVYNLIHEKGIVYKILLACSVSIFTSCLLFGLPWFAPCQPCPSGAREICPTIGRSGNFKKFQCAPGHYNDLASLIFNTNDDAIKNLFSKDTDSEFHFSSMLTFFITCFSLSILSYGTVAPVGLFVPVIVTGASYGRFVGMVVGPYTNLSHGFFAILGAASFLGGSMRTTVSLCVIMLELTNNLLLLPLVMLVLLISKTVADAFNSNIYNLIMKAKGFPYLEGHVEPYMRQLTVADVLTSPLQVLHGIEKVRNVVDILKWTSHHGFPVVNEPPFSEFPVLYGLILRAHLIVLLKKKAFLPVPTLGSERKDAFKLFSTDDFAKMGLGDVDRIEGVQLTDEEMEMFIDLHPFANTSPCTVLETMSLAKALEIFRETGLRHMLVIPKVPGRSPVVGVLTRHDFMPDYILSLHPLLEKSRWKRLRIKFHLKKKFF | 657 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 66312765 | 66317982 | + | Hsped.08g25040.1 | Hepe08g2504 | 578476 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g2504 | 657 | Gene3D | - | 448 | 629 | IPR046342 | - | |
| Hepe08g2504 | 657 | Pfam | CBS domain | 579 | 627 | IPR000644 | - | |
| Hepe08g2504 | 657 | SUPERFAMILY | CBS-domain pair | 450 | 627 | IPR046342 | - | |
| Hepe08g2504 | 657 | ProSiteProfiles | CBS domain profile. | 577 | 637 | IPR000644 | - | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 57 | 76 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 121 | 140 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 434 | 448 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 396 | 415 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 26 | 43 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 378 | 394 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Chloride channel signature | 346 | 366 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Plant CLC chloride channel signature | 298 | 314 | IPR002251 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Plant CLC chloride channel signature | 142 | 150 | IPR002251 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Plant CLC chloride channel signature | 156 | 166 | IPR002251 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro) | |
| Hepe08g2504 | 657 | PRINTS | Plant CLC chloride channel signature | 174 | 181 | IPR002251 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro) | |
| Hepe08g2504 | 657 | Gene3D | Clc chloride channel | 1 | 447 | - | - | |
| Hepe08g2504 | 657 | SMART | cbs_1 | 580 | 633 | IPR000644 | - | |
| Hepe08g2504 | 657 | SMART | cbs_1 | 467 | 520 | IPR000644 | - | |
| Hepe08g2504 | 657 | SUPERFAMILY | Clc chloride channel | 3 | 449 | IPR014743 | - | |
| Hepe08g2504 | 657 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 1 | 628 | IPR051280 | GO:0009705(PANTHER)|GO:0015108(PANTHER)|GO:0043231(PANTHER) | |
| Hepe08g2504 | 657 | Pfam | Voltage gated chloride channel | 15 | 428 | IPR001807 | GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe08g2504 | 657 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 459 | 629 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g3395 | Hepe-Chr2:83409427 | Hepe08g2504 | Hepe-Chr8:66312765 | 1.80e-226 | dispersed | |
| Hepe03g0183 | Hepe-Chr3:2297330 | Hepe08g2504 | Hepe-Chr8:66312765 | 1.03e-177 | dispersed | |
| Hepe07g0546 | Hepe-Chr7:5778568 | Hepe08g2504 | Hepe-Chr8:66312765 | 1.50e-246 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g2504 | K05016 | - | csv:101216071 | 1185.63 |