Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g2554 | ACAAGCAAACCACAAAACCACTGTTTTTCTCTCTTTTGTTTTTCCTCTGAGAAAACTAAAAACTCTTCTGCCATGGCAGCCATAGCCAGAGATGAGTCCGATTACGACAGCAGTTGCTCCTCCATAACCGTCCCGGACTCCAGCCGCAGCTGGATGAGCAACCTCAGCTTCGGTAGCCGCCGCCGCAGTAGCTCCGCCGAACACGGCAGCTCACCAGTCCAAAAGCCACACAAAGCAAACCAAGTAGCGTGGGAGGCGATGCGGTGGCTCCGGGGAGTGAAGGGGCGGGTCGGACTGGAGCACTTCCGGCTGCTACGGCGGCTCGGAAGTGGAGACATAGGGAATGTTTATCTGTGCCAAATAAGGAATCCGATGGTGGGTTTGCCGCAGTGCTTTTACGCGATGAAAGTGGTTGATAGAGAAGCGCTTTCGGTGAGGAATAAAGAGAGGAGGGCGGATATGGAGAAGGAGATATTGAAAGTGCTTGATCATCCATTTTTGCCCACGCTTTATGCGGAGTTTGAAGCTTCTCATTATTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGGGATTTGTACGCCGCTCGCCAACGCTTGCCCGGAAAACGATTTTCCATTTCTTCCGCTAAATTTTATGCAGCAGAGATAATTTTAGCCCTAGAGTATTTGCACATGATGGGCATAGTTTACAGAGATTTAAAGCCTGAAAACGTGCTGGTTAGAGAAGACGGCCACATCATGCTGTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCCTCCGTTCCCGGACCACCACCGAACGCCACGTCACAACCTCCTCCTCCGCCTGCGCCGCCGCCCCCATTCAGCCCGTCCTCTCCTGTTTCTCCCTCTCCCGCCGCCAAAAATCCACCACCGTCACCACCATCACCGAACACGCCACCTCCGCCTCCGTCGCATACGGCGGCGACACCGAATTCGACCCAGAGCCAGAATTAGTAGCGGAGCCAATAAACGCGAGATCAAAATCATTCGTGGGAACCCATGAATATTTGGCGCCGGAGGTGATTTCCGGTCAAGGCCACGGCAGCGCCGTCGACTGGTGGACATTGGGGATTTTCCTATACGAAATGTTGTACGGAAAAACTCCATTCAAAGGGGAAAACAACGAGAAAACGCTAATCAACATTTTGAAGCAGCCATTAACGTTTCCAAAATCTGGGTTTAGTTGCAGTAACATCAAAGAGTATGAAGAAATGGCGAAAGTTGAAGAATTAATCAAGAAACTTTTGGTGAAGAATCCGAAAAAAAGAATCGGAAGCTTAAAAGGTTCGGTTGAAATCAAAAGAGATGAGTTTTTCAAAGGGGTTAATTGGGCTTTAATCCGATCCGTACAACCTCCTCAAATCCCTAATTCCGAGATTAACAAATCTAATTACCCTTCTAATTATTACTTACCCAAATTCACCAAGAAACAAAGAGAACAACCCTACCAAATCCCTTCTCACCATTTTGATTACTTCTAA | 1518 | 48.62 | TSKPQNHCFSLFCFSSEKTKNSSAMAAIARDESDYDSSCSSITVPDSSRSWMSNLSFGSRRRSSSAEHGSSPVQKPHKANQVAWEAMRWLRGVKGRVGLEHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALSVRNKERRADMEKEILKVLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYAARQRLPGKRFSISSAKFYAAEIILALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLLRSRTTTERHVTTSSSACAAAPIQPVLSCFSLSRRQKSTTVTTITEHATSASVAYGGDTEFDPEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGIFLYEMLYGKTPFKGENNEKTLINILKQPLTFPKSGFSCSNIKEYEEMAKVEELIKKLLVKNPKKRIGSLKGSVEIKRDEFFKGVNWALIRSVQPPQIPNSEINKSNYPSNYYLPKFTKKQREQPYQIPSHHFDYF | 505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 67162861 | 67165398 | + | Hsped.08g25540.1 | Hepe08g2554 | 578526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g2554 | 505 | FunFam | protein kinase PINOID 2 | 100 | 186 | - | - | |
Hepe08g2554 | 505 | FunFam | protein kinase PINOID | 187 | 255 | - | - | |
Hepe08g2554 | 505 | Gene3D | Transferase(Phosphotransferase) domain 1 | 337 | 469 | - | - | |
Hepe08g2554 | 505 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 452 | 505 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2554 | 505 | ProSiteProfiles | Protein kinase domain profile. | 102 | 451 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2554 | 505 | FunFam | serine/threonine-protein kinase D6PK-like | 337 | 469 | - | - | |
Hepe08g2554 | 505 | CDD | STKc_phototropin_like | 101 | 468 | - | - | |
Hepe08g2554 | 505 | Pfam | Protein kinase domain | 339 | 437 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2554 | 505 | Pfam | Protein kinase domain | 103 | 259 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2554 | 505 | Gene3D | Transferase(Phosphotransferase) domain 1 | 187 | 256 | - | - | |
Hepe08g2554 | 505 | PANTHER | FLIPPASE KINASE 1-RELATED | 37 | 487 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Hepe08g2554 | 505 | SUPERFAMILY | Protein kinase-like (PK-like) | 80 | 488 | IPR011009 | - | |
Hepe08g2554 | 505 | Gene3D | Phosphorylase Kinase; domain 1 | 100 | 186 | - | - | |
Hepe08g2554 | 505 | SMART | serkin_6 | 102 | 451 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2554 | 505 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 228 | 240 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0915 | Hepe-Chr7:11928682 | Hepe08g2554 | Hepe-Chr8:67162861 | 4.99e-112 | dispersed | |
Hepe07g1732 | Hepe-Chr7:59423790 | Hepe08g2554 | Hepe-Chr8:67162861 | 6.08e-125 | dispersed | |
Hepe08g0237 | Hepe-Chr8:2119701 | Hepe08g2554 | Hepe-Chr8:67162861 | 1.07e-124 | dispersed | |
Hepe08g0238 | Hepe-Chr8:2139715 | Hepe08g2554 | Hepe-Chr8:67162861 | 1.93e-123 | dispersed | |
Hepe08g0359 | Hepe-Chr8:3219992 | Hepe08g2554 | Hepe-Chr8:67162861 | 1.22e-94 | dispersed | |
Hepe08g0842 | Hepe-Chr8:7607966 | Hepe08g2554 | Hepe-Chr8:67162861 | 6.62e-97 | dispersed | |
Hepe08g2554 | Hepe-Chr8:67162861 | Hepe09g0786 | Hepe-Chr9:7670562 | 3.32e-19 | dispersed | |
Hepe08g2554 | Hepe-Chr8:67162861 | Hepe07g1432 | Hepe-Chr7:47620532 | 3.47e-137 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73091 | PF00069 | Pkinase | 3.40E-32 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g2554 | K08286 | - | csv:101202905 | 791.186 |