Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2570 ATGGCTCCTGCAATCTCTCTTTGCTCTGTTTTTGTTGTTGTTTTTCTTGTTCTGACTCAGTGGGTCGACTCGGAGCCGACTCAGGATAAACAAGCCCTTCTCGATTTCCTCTCTAGAGCTCCTCATGAGAATCGGGTTCAATGGAATTCTTCTAATTCTATTTGTAATTGGATCGGCGTTGAGTGCAATTCGAATCAGTCGTTTGTTTATGCCCTTCGTTTGCCCGGCGTTGGCCTCGTCGGTCCGATTCCGGCTAACACCTTAGGGAAATTGACTCAGCTCCGAGTTCTCAGCCTCCGGTCGAATCGTCTCTCCGGTGAGATCCCGTCGGATTTTTCCAATTTGATAATGCTGCGGAATTTGTATCTTCAGGATAATGCCTTCTCCGGCGAGTTTCCGCCGAGTTTGACTCGGTTGACTCGTCTAACTCGGCTGGATTTGTCGATGAACGATTTTTCCGGTCCGATTCCGGCGGCGGTTGACAATCTGACTCACTTGAGTGGGATTTTCTTGCAGAGTAATGGCTTCTCCGGTTCACTCCCGACGATCTCGGCTGTTAATTTAACAAACTTCAACGTCTCGAATAACAAACTCAACGGCTCGATTCCGAATTCGTTAGCGAAATTCCCCGCTTCCTCCTTCGCCGGAAATCTAGATCTCTGCGGCGGACCATTCCCCTCATGCAACCCAATCTCTCCGTCTCCATTGCAAAATCCACCGCTCACCGGAAGAAAATCGAAGAAGCTCTCCACGGCGGCGATAATCGGAATCGTAATCGGAGCGATCTTCGCCGCGTTTCTCCTCCTCCTCATCCTGATCCTCTGCATCCGCCGTCGCACCCGGCAAAACCCCGCGAAGACCCAGAAGCCATCTGCAGCAACAGTAGCGACAAGATCGATTCCGGCAGCAGAGGCGGGGACGTCGTCGTCGAAAGACGACATTACCGGAGGGTCGGTGGAGGCGGGGGAGAGGAACAAGCTGGTGTTCTTGGAAGGAGGGATTTACAACTTCGATTTGGAGGATCTGTTGAGGGCTTCGGCGGAGGTGTTGGGGAAAGGTAGTGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGGACGACGGTGGTGGTGAAAAGACTGAAGGATGTGGTGGTGACGAAGAAGGAATTCGATACGCAAATGGAGATTTTGGGGAAAATTAAACATGAAAATGTGGTTCCTCTCAGAGCATTTTACTTCTCTAAAGATGAGAAATTGCTGGTTTATGATTATATCCCCACCGGAAGTTTGTCGGCGAGTCTTCACGGAAGCAGAGGCTCCGGCAGGACACCGCTGGACTGGGATTCAAGAATAAGAATAGCACTAAGCGTCGGCAGAGGACTAGCCCATCTCCACCTCGCCGGCAAGGTGGTTCACGGCAACATTAAATCCTCCAACATCCTTCTCCGGCCAGACCACGACGCCTGCCTCTCCGATTTCGGCCTCAACCCAGTTTTCGGCACCGCCACGCCGCCCAACCGCGTCGCCGGCTACCGAGCACCGGAAGTCGTCGAAACCCGAAAAGTCACTTTCAAATCCGACGTTTACAGCTACGGCGTTCTCCTCCTCGAGCTCTTGACCGGAAAAGCTCCGAACCAGCAGTCCCTCGGCGAGGACGGAATCGACCTTCCCCGGTGGGTCCAATCCGTCGTCCGGGAGGAATGGACGGCGGAGGTTTTCGACGCAGAATTGTTGCGATTCCACAACATCGAAGAAGAGATGGTTCAGTTGCTGCAGATCGCAATGTCCTGCGTTTCGACGGTCCCCGATCAGCGGCCGGCGATGGCAGAAGTTGTACGGATGATCGAAGATATGAACAGTCACAGGAGTGAGACCGACGACGGGTTGCGCCAGTCTTCCGATGACCCATCGAAAGGATCTGACGTCAACACGCCGCCGGCGGAGTCTAGAACGCCGCCGAGAGTGACGCCGTAG 1956 53.53 MAPAISLCSVFVVVFLVLTQWVDSEPTQDKQALLDFLSRAPHENRVQWNSSNSICNWIGVECNSNQSFVYALRLPGVGLVGPIPANTLGKLTQLRVLSLRSNRLSGEIPSDFSNLIMLRNLYLQDNAFSGEFPPSLTRLTRLTRLDLSMNDFSGPIPAAVDNLTHLSGIFLQSNGFSGSLPTISAVNLTNFNVSNNKLNGSIPNSLAKFPASSFAGNLDLCGGPFPSCNPISPSPLQNPPLTGRKSKKLSTAAIIGIVIGAIFAAFLLLLILILCIRRRTRQNPAKTQKPSAATVATRSIPAAEAGTSSSKDDITGGSVEAGERNKLVFLEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFDTQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYIPTGSLSASLHGSRGSGRTPLDWDSRIRIALSVGRGLAHLHLAGKVVHGNIKSSNILLRPDHDACLSDFGLNPVFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEDGIDLPRWVQSVVREEWTAEVFDAELLRFHNIEEEMVQLLQIAMSCVSTVPDQRPAMAEVVRMIEDMNSHRSETDDGLRQSSDDPSKGSDVNTPPAESRTPPRVTP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 67362052 67367994 - Hsped.08g25700.1 Hepe08g2570 578542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2570 651 SUPERFAMILY Protein kinase-like (PK-like) 348 609 IPR011009 -
Hepe08g2570 651 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 419 623 - -
Hepe08g2570 651 CDD STKc_IRAK 350 612 - -
Hepe08g2570 651 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Hepe08g2570 651 MobiDBLite consensus disorder prediction 613 651 - -
Hepe08g2570 651 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Hepe08g2570 651 ProSiteProfiles Protein kinase domain profile. 344 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2570 651 FunFam pollen receptor-like kinase 1 314 418 - -
Hepe08g2570 651 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515(InterPro)
Hepe08g2570 651 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515(InterPro)
Hepe08g2570 651 Pfam Leucine Rich Repeat 93 115 IPR001611 GO:0005515(InterPro)
Hepe08g2570 651 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515(InterPro)
Hepe08g2570 651 Pfam Protein kinase domain 348 607 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2570 651 PANTHER OS05G0588300 PROTEIN 10 617 IPR050994 -
Hepe08g2570 651 MobiDBLite consensus disorder prediction 285 317 - -
Hepe08g2570 651 Gene3D Phosphorylase Kinase; domain 1 314 418 - -
Hepe08g2570 651 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Hepe08g2570 651 MobiDBLite consensus disorder prediction 629 643 - -
Hepe08g2570 651 Gene3D Transferase(Phosphotransferase) domain 1 419 632 - -
Hepe08g2570 651 MobiDBLite consensus disorder prediction 613 628 - -
Hepe08g2570 651 SUPERFAMILY L domain-like 49 225 - -
Hepe08g2570 651 MobiDBLite consensus disorder prediction 285 315 - -
Hepe08g2570 651 Gene3D Ribonuclease Inhibitor 185 232 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2407 Hepe-Chr2:69734346 Hepe08g2570 Hepe-Chr8:67362052 1.44e-120 dispersed
Hepe02g3118 Hepe-Chr2:80336980 Hepe08g2570 Hepe-Chr8:67362052 7.92e-65 dispersed
Hepe04g1261 Hepe-Chr4:68140587 Hepe08g2570 Hepe-Chr8:67362052 6.68e-80 dispersed
Hepe05g0329 Hepe-Chr5:4056429 Hepe08g2570 Hepe-Chr8:67362052 1.55e-104 dispersed
Hepe06g0764 Hepe-Chr6:54192525 Hepe08g2570 Hepe-Chr8:67362052 5.26e-130 dispersed
Hepe07g0328 Hepe-Chr7:3302036 Hepe08g2570 Hepe-Chr8:67362052 7.91e-76 dispersed
Hepe07g2340 Hepe-Chr7:67769684 Hepe08g2570 Hepe-Chr8:67362052 3.49e-147 dispersed
Hepe07g2574 Hepe-Chr7:70214264 Hepe08g2570 Hepe-Chr8:67362052 5.79e-57 dispersed
Hepe08g0676 Hepe-Chr8:6049883 Hepe08g2570 Hepe-Chr8:67362052 1.31e-167 dispersed
Hepe08g2570 Hepe-Chr8:67362052 Hepe09g0414 Hepe-Chr9:3727277 1.83e-73 dispersed
Hepe08g2570 Hepe-Chr8:67362052 Hepe09g0729 Hepe-Chr9:6950197 2.14e-267 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73092 PF00069 Pkinase 2.90E-37 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2570 - - - 0.0