Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2594 ATGTCAACCCCTACTCCGGCGCCGACGTCTCCTCCGGCGACCAACACCACCTCTCCGCCGCCGGCAACCCCCACTGCTCCACCGCCCTCGACTCCATCCTCTCCGCCTCCGCCGGCCTCTACTCCACCACCAACAACCACTCCCTCGCCACCTCCACCTTCCGCCGCAACGCCACCCACTCCTTCTCAGCCTCCGCCGACCTCCGCCCCACCCCCGGTAACCCCATCGCCGCCGACGCCATCTACTCCCCAGCCCACCCCGCCTACTACCTCTCCCTCGCCGCCGTCTACGCCATCTACTCCCTCAACTTCTCCTCCTCCTCCCGCCGTCCGTACTCCGCCGCCTCCGACTCCTCGTACGCCGTCCACTCCGTCGAGAAGTCCTCCGCCACCGTCAACGCCGTCGTCCTCCTCCTCCTCCCCCTCGCCTAATATCTCGACCGGACTTGTCGTCGGAATTGCAATTGGCGGAGTGGTAATTGTTCTTCTGCTAAGTATATTGTGTGTTTGTTGCACAAAGAAAAGGAGAAGACGACGAGATGAAGAGGGATTTTATCCACACCCTCCGCCTGGACCAAAAGTGGACTCTTATGGTGGTCAGCAGCAATGGCAGCACAATGCTCCTCTGCCGCAGGATCCTGTAATTGGGATGGTGCCTAAGCCATCTCCACCTCCGGCAGTTGCATCCCGACCCCCACATTCTCCGACTGGCGTTCGGCCTCTGCCTCCGCCGCTCTATATGAGTAGCAGTGGAGGTTCGGGCTCTATGTATTCCGGGCCTGAAACTCCGCTCCCTCCGCCGCCACCTCCTCCTATGTCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCAACCGATGGATTTTCGGATGCGAATCTCCTTGGACAAGGCGGATTCGGATATGTGCATAGAGGAGTTCTTCCTAATGGAAAGGAAGTTGCAGTCAAGCAATTGAAAGCTGGAAGCGGGCAGGGCGAACGAGAATTTCAGGCTGAAGTCGATATTATCAGCCGAGTTCATCACAAACATCTTGTTTCCTTGGTTGGTTATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTCCAAACAACACTTTGGAGTTCCATTTACATGGTAAAGGGCGACCGACCATGGATTGGCAGATGAGACTCAAACTCGCTTTAGGATCAGCAAAAGGACTAGCTTATCTTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATCAAAGCTGCTAACATACTGTTGGATTTCAAGTTTGAAGCAATGGTTGCTGATTTTGGACTTGCAAAGTTTTCATCTGATGTCAATACCCATGTATCGACTCGAGTCATGGGTACTTTCGGGTATCTTGCACCAGAGTATGCCTCAAGTGGCAAACTTAGTGACAAATCAGATGTTTTCTCCTTTGGAGTTATGCTTTTGGAGTTGATCACCGGTCGTCGACCAGTCGATACGAGTAATACTTTCATGGAAGATAGTCTCGTAGATTGGGCTAGGCCGTTGTTGAACCGAGCTTTAGAAGATGGAAACTTTGATCCTTTGGTCGATCCAAGGATGCAGAACAACTACAACCACAATGAGATGGCTCGCATGGTTGCCTGTGCCGCTGCTTGTGTGCGACATTCTGCAAGGCGCCGACCACGAATGAGCCAGGTAGTACGAGCGCTCGAAGGAGACGCATCACTATCAGATCTCAACGAAGGAGTCAAACCCGGGCAGAGCACAGTGTACAGTTCACATGGAAGCTCAGACTACGACACCCACCAGTACAACGAGGACTTGAGGAAGTTCAGGAAGATGGCACTGGGAAGCGCGGAGTATGGAGCGAGCAGCGAATACAGCAGACCGACAAGTGAGTACGGGCTGTATCCTTCGGGGTCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGTGAAGAAAGAGAGTGGAGGCTTCAGTGGAGGATCTTGA 1992 53.11 MSTPTPAPTSPPATNTTSPPPATPTAPPPSTPSSPPPPASTPPPTTTPSPPPPSAATPPTPSQPPPTSAPPPVTPSPPTPSTPQPTPPTTSPSPPSTPSTPSTSPPPPAVRTPPPPTPRTPSTPSRSPPPPSTPSSSSSSPSPNISTGLVVGIAIGGVVIVLLLSILCVCCTKKRRRRRDEEGFYPHPPPGPKVDSYGGQQQWQHNAPLPQDPVIGMVPKPSPPPAVASRPPHSPTGVRPLPPPLYMSSSGGSGSMYSGPETPLPPPPPPPMSFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQMRLKLALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAMVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLSDKSDVFSFGVMLLELITGRRPVDTSNTFMEDSLVDWARPLLNRALEDGNFDPLVDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDASLSDLNEGVKPGQSTVYSSHGSSDYDTHQYNEDLRKFRKMALGSAEYGASSEYSRPTSEYGLYPSGSSSEGQTTREMEMRTVKKESGGFSGGS 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 67789271 67793010 + Hsped.08g25940.1 Hepe08g2594 578566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2594 663 MobiDBLite consensus disorder prediction 620 645 - -
Hepe08g2594 663 MobiDBLite consensus disorder prediction 1 137 - -
Hepe08g2594 663 Pfam Protein tyrosine and serine/threonine kinase 298 566 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2594 663 FunFam Proline-rich receptor-like protein kinase PERK1 369 577 - -
Hepe08g2594 663 SUPERFAMILY Protein kinase-like (PK-like) 268 566 IPR011009 -
Hepe08g2594 663 MobiDBLite consensus disorder prediction 573 597 - -
Hepe08g2594 663 SMART serkin_6 293 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2594 663 Gene3D Transferase(Phosphotransferase) domain 1 369 579 - -
Hepe08g2594 663 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 118 610 IPR047117 -
Hepe08g2594 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2594 663 MobiDBLite consensus disorder prediction 176 269 - -
Hepe08g2594 663 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524(InterPro)
Hepe08g2594 663 MobiDBLite consensus disorder prediction 214 242 - -
Hepe08g2594 663 MobiDBLite consensus disorder prediction 1 143 - -
Hepe08g2594 663 Gene3D Phosphorylase Kinase; domain 1 272 368 - -
Hepe08g2594 663 MobiDBLite consensus disorder prediction 617 663 - -
Hepe08g2594 663 MobiDBLite consensus disorder prediction 577 595 - -
Hepe08g2594 663 FunFam proline-rich receptor-like protein kinase PERK1 271 368 - -
Hepe08g2594 663 ProSiteProfiles Protein kinase domain profile. 293 572 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2594 663 PRINTS Proline rich extensin signature 25 42 - -
Hepe08g2594 663 PRINTS Proline rich extensin signature 50 75 - -
Hepe08g2594 663 PRINTS Proline rich extensin signature 4 20 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3246 Hepe-Chr2:82026244 Hepe08g2594 Hepe-Chr8:67789271 1.31e-148 dispersed
Hepe08g1024 Hepe-Chr8:9837175 Hepe08g2594 Hepe-Chr8:67789271 6.48e-189 dispersed
Hepe08g2594 Hepe-Chr8:67789271 Hepe10g1850 Hepe-Chr10:55220573 4.08e-138 dispersed
Hepe10g1621 Hepe-Chr10:52927749 Hepe08g2594 Hepe-Chr8:67789271 3.95e-70 dispersed
Hepe03g1575 Hepe-Chr3:72626890 Hepe08g2594 Hepe-Chr8:67789271 9.58e-68 wgd
Hepe05g1867 Hepe-Chr5:68967934 Hepe08g2594 Hepe-Chr8:67789271 2.18e-41 wgd
Hepe08g2594 Hepe-Chr8:67789271 Hepe09g0761 Hepe-Chr9:7360508 1.40e-238 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73093 PF07714 PK_Tyr_Ser-Thr 6.50E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2594 - - - 0.0