Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2601 ATGGGGGAAGAAGATTCTGCCGGTGCGCCGCAGAAGAAGGCTCAATCAGATGGTGCAGCGTTGAGTAATTCTTCTTCATCGGATATTCCATCTAAGAAGCTCGCTAGACAGCTCGATTTCACCGGCTATGGAGGCGCCTCGCATCCTCAATCTCATTCCAACTCGCATTCACAGTCACAGGCTCCATTAGTTGCTCAGAATCTTCCTCAAGCTCAGCCGAAGCCACAGCCGCAGATGGTGGCGGCGTCGATCGCACCTTTGGCGCCTCATTCGTCAGTAAGAGCTGTGAAACCAGAATCACCAATGTCAAGAGCAAGACCTGCTGTTGAAACTAAAGACAGTACTCCTAAGAAGCAAAAACAGTGTAACTGTAAACATTCGCGGTGTCTAAAATTGTATTGTGAATGCTTTGCTTCTGGAATATACTGTGATGGCTGCAACTGCATAAATTGTTATAACAATGTTGAAAATGATGCTGCTAGAAGAGAAGCAGTTGAAGCTACATTAGAGCGTAATCCAAATGCATTTCGACCAAAAATTGCAAGCAGTCCTCATGGAATGCGGGACAGCAGGGAGGAGGCGGGGGAGTTGCTGATGTTGCCTAAGCACAATAAGGGATGCCACTGCAAGAAGTCGGGTTGTCTAAAGAAATATTGTGAGTGTTTCCAGGCTAACATTCTCTGCTCGGATAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAAGCTCTTTTTCATGGAGACCATGGTAACAACATAGCATTCATTCAACAGGCAGCTAATGCTGCCATAACTGGAGCTATTGGCTCCTCTGGCTATGCTTCACCTCCAGTATCCAAAAAAAGGAAAGGTCAAGAACTCTACTTTGGACCGACAGCCAAGGACCTATCCACTCATAGACCAGTGCCATTTCAACAGGCAAATCATATCAGAGCCACTGCTCCGCCGCTACCGTCCTTCCCCATTGCTGGTGTTGGAAGCCCCTCATTGTTGGGTCCTTCAAAGTTTACCTATAGGTCTCTAATGGCAGACATCATTCAATCACAAGATTTGAAGGATCTTTGCTCTGTTTTGGTGGTGCTGTCAAGTGAAGCTGCCAAGACATTTCAAGACCAAACAAATGCTACAGAGAAGCAATCTGATTGCCAGACAGAAACTTCTGTTGCATCATCCACTCAAGATAGATTGCAGAAAAAAGATGCATCTGATGAGAAAGCCGCAGCCGATGATCGTTCAAGTGCAAACCAGGCCGATAAAACCACCCCCGATGATTCCAATTCAGATGGTGGAGATGTGCCAAAGGGCGCTCCCATGTCTCCCGGAACTTTAGCTTTGATGTGTGATGAGCAAGATACAATTCTAATGGCTGCTGCTTCCCCCAATAGATTAACAGGTCCAGGCTGCAGCACCTCTTCACAACTGCCTCACAGACAAGACATGTCAGAGGTCTATGCAGAGCAGGAGAGGATCGTCCTAACAAAGTTTCGGGATTGTCTCAATAGACTCATCACTTTGGGAGAAATAAAAGAGACACAGTGTTCATCTTTAGCCAGAAGTGAAGTAGGTAATCAAGAACAACAATTTAACAATGGCACTACAAATTCTAGAACTGAAACTGAAACTCATTCGGCCCAACTCAACAATAAAGTTACGAAATCTTCGATTCCACCATCGGTGAAGACATCGCAGACAGTAACTGCAGCAGTCATGACCCTTAGCAACGATCAACGACAGAAAGTTTTGCCTCTGTCTTGA 1770 45.65 MGEEDSAGAPQKKAQSDGAALSNSSSSDIPSKKLARQLDFTGYGGASHPQSHSNSHSQSQAPLVAQNLPQAQPKPQPQMVAASIAPLAPHSSVRAVKPESPMSRARPAVETKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGMRDSREEAGELLMLPKHNKGCHCKKSGCLKKYCECFQANILCSDNCKCMDCKNFEGSEERQALFHGDHGNNIAFIQQAANAAITGAIGSSGYASPPVSKKRKGQELYFGPTAKDLSTHRPVPFQQANHIRATAPPLPSFPIAGVGSPSLLGPSKFTYRSLMADIIQSQDLKDLCSVLVVLSSEAAKTFQDQTNATEKQSDCQTETSVASSTQDRLQKKDASDEKAAADDRSSANQADKTTPDDSNSDGGDVPKGAPMSPGTLALMCDEQDTILMAAASPNRLTGPGCSTSSQLPHRQDMSEVYAEQERIVLTKFRDCLNRLITLGEIKETQCSSLARSEVGNQEQQFNNGTTNSRTETETHSAQLNNKVTKSSIPPSVKTSQTVTAAVMTLSNDQRQKVLPLS 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 67850044 67855451 - Hsped.08g26010.1 Hepe08g2601 578573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2601 589 PANTHER TESMIN/TSO1-RELATED 31 518 IPR028307 GO:0005634(PANTHER)|GO:0006355(PANTHER)
Hepe08g2601 589 MobiDBLite consensus disorder prediction 401 417 - -
Hepe08g2601 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 119 154 IPR005172 -
Hepe08g2601 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 205 239 IPR005172 -
Hepe08g2601 589 ProSiteProfiles CRC domain profile. 118 242 IPR005172 -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 374 448 - -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 1 79 - -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 44 77 - -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 16 32 - -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 91 119 - -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 418 432 - -
Hepe08g2601 589 SMART CXC_2 202 243 IPR033467 -
Hepe08g2601 589 SMART CXC_2 117 157 IPR033467 -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 524 564 - -
Hepe08g2601 589 MobiDBLite consensus disorder prediction 374 400 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2601 Hepe-Chr8:67850044 Hepe10g0268 Hepe-Chr10:2771816 1.17e-16 dispersed
Hepe08g2601 Hepe-Chr8:67850044 Hepe09g0773 Hepe-Chr9:7455974 2.88e-206 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56287 PF03638 TCR 2.90E-12 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2601 - - - 0.0