Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g2630 | ATGAAGACCAAGACGCCATTGAAGCAGCTCAAACTCTCCGTTCCCGCTCAAGAAACTTCTATCCGTTCTTTCCTAACTGCAAGTGGAACGTTTCACGACGGCAATCTGCTACTGAACCAGAAAGGATTGCGTCTTATATCCGAAGAGAAAGAAGTGCAGACTTCAGATTGTAAGGAGCTGGATGTCGATTTCTCATTGGAAGATCTAGAGACTGTGAAAGTCATCGGAAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGTCACAAATGGGTTGGAAAACTTTTTGCCTTGAAGGTCATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTGCAGGAACTGAAAATAAATCAAGCAGCACAATGTCCACATATTGTGGTCTGCTATCATTCTTTCTACCATAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGTGGTTCTTTAGCCGATGTAGTCAGACATGTCAAAACAATTCTTGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGACATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTGAACCATAAAGGGGAGGTCAAAATCACTGATTTTGGAGTAAGTGCAATGCTAGCAAGTTCTATGGGTCAGAGAGATACATTTGTAGGGACTTACAATTACATGTCGCCTGAGCGAATTAGCGGAGGAACATATGATTACAGCAGTGATATATGGAGCTTGGGCCTGGTAGTACTTGAATGTGCCATTGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGCTGGCCAAGCTTTTATGAACTTTTAGAAGCAATTGTATCAAAGCCACCGCCTATTGCTCCACCAGATCAATTTTCTCCCGAGTTCTGTTCATTCGTATCTGCTTGCATTAAGAAGGACCCTAAAGAAAGATCATCATCATTAGATCTTCTGAATCATCCTTTCATCAAGAAATTCGAAGATAAAGACATCGATCTCGGGATTCTCGTGGGCAGCTTGGATCCTCCTGTAAGTTTTCCTAGATAA | 1065 | 41.5 | MKTKTPLKQLKLSVPAQETSIRSFLTASGTFHDGNLLLNQKGLRLISEEKEVQTSDCKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCYHSFYHNGAISLVLEYMDRGSLADVVRHVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVSKPPPIAPPDQFSPEFCSFVSACIKKDPKERSSSLDLLNHPFIKKFEDKDIDLGILVGSLDPPVSFPR | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 68262406 | 68266089 | - | Hsped.08g26300.1 | Hepe08g2630 | 578602 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g2630 | 354 | ProSiteProfiles | Protein kinase domain profile. | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2630 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g2630 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 67 | 339 | IPR011009 | - | |
Hepe08g2630 | 354 | SMART | serkin_6 | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2630 | 354 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g2630 | 354 | Pfam | Protein kinase domain | 70 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2630 | 354 | FunFam | Mitogen-activated protein kinase kinase 6 | 150 | 348 | - | - | |
Hepe08g2630 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 343 | - | - | |
Hepe08g2630 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 148 | - | - | |
Hepe08g2630 | 354 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 24 | 341 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Hepe08g2630 | 354 | CDD | PKc_MAPKK_plant_like | 67 | 333 | - | - | |
Hepe08g2630 | 354 | FunFam | Mitogen-activated protein kinase kinase 6 | 39 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1784 | Hepe-Chr2:25901475 | Hepe08g2630 | Hepe-Chr8:68262406 | 7.82e-77 | dispersed | |
Hepe07g2336 | Hepe-Chr7:67729766 | Hepe08g2630 | Hepe-Chr8:68262406 | 1.27e-66 | dispersed | |
Hepe08g2630 | Hepe-Chr8:68262406 | Hepe09g0895 | Hepe-Chr9:8971228 | 2.95e-157 | dispersed | |
Hepe08g2630 | Hepe-Chr8:68262406 | Hepe08g2677 | Hepe-Chr8:68806504 | 2.47e-143 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73096 | PF00069 | Pkinase | 3.70E-66 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g2630 | K04368 | - | csv:101218848 | 683.33 |