Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2676 ATGACATCGGTGTCGGTTGCCGTTAACGGCGCCCGCGGCGGCCGAGGCGGCGGAGGAAGCCGCCGCGCCGTCAGATGGGCCGTCGAGAATCTATTGCCAACCGCCGATCGCTTCATTTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCGTGTGGCTGTCTCAGATCTTGATGCAGATGTGGTAGCACTTTATATGCATGATGTGAAAGAAAAATATGAACAAGTTTTTGTCCCTTTTAAAAAGTTGTGTAGAAGAGAAAAGTTTCTTCTTCTAGTAGAAACTTTGATTTTGGAGGATGACAATCCTGCCACTGCACTTTTGAGATATGCATCTGAATCTGGGATTAAACACTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAGCTAAAAGGGGATTCAGTACCCTCGGCTATTCTGAGAACTGCTCCTAGTTCTTTTGATGTTTATGTTATATATAGGAGAAGAGTCATCACAAGAACTGCTAGTACTGCTCCATCTAATAAAACTGACTACAAGGGTTCCACTGGTGTTAGTGAAAAATCTTCTGGGACTCTTTCTTCTTCTTCTTCCTTGTCGATTCTTCATCGAAAAGGCGATAGCCTCGAAGTTAATTCTACTGAGCAACTCAACTCTTTTAGTACTCTCACTGAGGAGGAAGATATGCGGGCTGAAGTTGAATCACTGCATCAAGATTTGGAAACAACTGTTTCCTTGTACAAACAAGCATGTGAGGAACTAGTACATGCTCAGAAGAAGGTTCAGTCACTTACATCAGAATGCATTGAAGAATCAAGAAGAGTGAATGCTGCTTTAGAAAGGGAACAAACTTTGAGGAAAGTTGCTGCTGAAGAAAGAGCAAAGCACTTGGAAGCCATTAAGGAGCTTGAGGAGGCAAAAGACCTTCTGGCTAAAGAAGCTTATGAAAGGCAGCTGGCTGAGCTTAATGCCTTAAAGGAGTCCTTGGAGAAGCAGAAAATGGTCGATACTCTTCTGATTAATGATAGGAGGTATAGACGATATACGACGGCCGAAATAGAAGCTGCGACGAATTTCTTTGACGAAGTTAATGTGATCGGCGAGGGAGGATATGGGAAAGTCTACAAATGCAGTCTCGATCATACTCCAGTAGCCATTAAGGTTTTTCGACACGACATATTCGAGAAAAAGGACGAGTTTCTGAAAGAGGTTGAAATTCTGAGCCAGATTCGTCATCCACATGTCGTCTTACTGCTCGGAGCTTGTCCCGAGCGAGGTTGTTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGAACATATCTTGCTCAAGAATGGAAAAACTCCCCTCCCTTGGTCTATTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGTCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATTATTCATAGAGATCTAAAACCAGGTAATATCTTACTAGACAGAAACTATGTAAGCAAAATCTCAGATGTTGGAATGTCGAAGATCATTGGCGACATCGTGCCCGACAACGTCACGGAGTACCGAAACACCGTTCTTGCTGGTACTCTACATTACATGGATCCTGAATATCAGAGAACCGGCACACTCCGACCGAAGTCGGATACATATGCACTTGGAGTGGCAATGCTGCAGTTGTTTACTGGACGGCAGCCACATGGTCTTCTTCTAGCTGTCGAGAATTCCGTCGCAAGCGCCTCGCTTGCAGATATTCTAGATAAATCAATTACTGACTGGCCTCTAGCTGAAGCTGAAAAGCTAGCTAGACTGGCACTGAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGAACTTGAAACTGAAGTTCTTCCTGTTCTTAAAAGGCTTGTTGATTTTGCAGATGCTTATCAAAATGAAGAAAATGGTTATGCCAATCCTCCAAGTCACTACTTCTGCCCAATCCTGCAGGAAATAATGGAGGATCCTTATATAGCAGCGGACGGATTTTCTTACGAGTATGTAGCGATTAAAGCATGGCTCGAGAAATACGACGTATCGCCGGTGACAAAGCTTAAGCTTCAACATTCTATGTTTATTCCAAACCACACTCTGCGTTCTGCCATACAAGAGTGGAGGTCAAGAGTGATATTTCCATCTTCCTAA 2160 43.38 MTSVSVAVNGARGGRGGGGSRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDRVAVSDLDADVVALYMHDVKEKYEQVFVPFKKLCRREKFLLLVETLILEDDNPATALLRYASESGIKHLVLGSCFRTCIARKLKGDSVPSAILRTAPSSFDVYVIYRRRVITRTASTAPSNKTDYKGSTGVSEKSSGTLSSSSSLSILHRKGDSLEVNSTEQLNSFSTLTEEEDMRAEVESLHQDLETTVSLYKQACEELVHAQKKVQSLTSECIEESRRVNAALEREQTLRKVAAEERAKHLEAIKELEEAKDLLAKEAYERQLAELNALKESLEKQKMVDTLLINDRRYRRYTTAEIEAATNFFDEVNVIGEGGYGKVYKCSLDHTPVAIKVFRHDIFEKKDEFLKEVEILSQIRHPHVVLLLGACPERGCLIYEYMENGSLDEHILLKNGKTPLPWSIRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNYVSKISDVGMSKIIGDIVPDNVTEYRNTVLAGTLHYMDPEYQRTGTLRPKSDTYALGVAMLQLFTGRQPHGLLLAVENSVASASLADILDKSITDWPLAEAEKLARLALKCLKLRCRDRPELETEVLPVLKRLVDFADAYQNEENGYANPPSHYFCPILQEIMEDPYIAADGFSYEYVAIKAWLEKYDVSPVTKLKLQHSMFIPNHTLRSAIQEWRSRVIFPSS 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 68800887 68805909 + Hsped.08g26760.1 Hepe08g2676 578648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2676 719 PANTHER OS02G0152300 PROTEIN 9 708 IPR051348 -
Hepe08g2676 719 Gene3D Transferase(Phosphotransferase) domain 1 435 643 - -
Hepe08g2676 719 CDD STK_N 26 161 - -
Hepe08g2676 719 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 334 434 - -
Hepe08g2676 719 SUPERFAMILY RING/U-box 635 713 - -
Hepe08g2676 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2676 719 MobiDBLite consensus disorder prediction 1 20 - -
Hepe08g2676 719 Pfam Protein tyrosine and serine/threonine kinase 366 618 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2676 719 Coils Coil 288 337 - -
Hepe08g2676 719 CDD RING-Ubox_WDSUB1-like 646 700 - -
Hepe08g2676 719 Gene3D HUPs 2 161 IPR014729 -
Hepe08g2676 719 SMART Ubox_2 648 710 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe08g2676 719 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 644 715 IPR013083 -
Hepe08g2676 719 Coils Coil 249 269 - -
Hepe08g2676 719 SMART serkin_6 362 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2676 719 Pfam U-box domain 646 711 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe08g2676 719 Gene3D Phosphorylase Kinase; domain 1 342 434 - -
Hepe08g2676 719 SUPERFAMILY Protein kinase-like (PK-like) 345 617 IPR011009 -
Hepe08g2676 719 ProSiteProfiles U-box domain profile. 644 717 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe08g2676 719 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 154 - -
Hepe08g2676 719 ProSitePatterns Protein kinases ATP-binding region signature. 368 389 IPR017441 GO:0005524(InterPro)
Hepe08g2676 719 Coils Coil 225 245 - -
Hepe08g2676 719 ProSiteProfiles Protein kinase domain profile. 362 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2676 719 FunFam Os07g0541700 protein 435 526 - -
Hepe08g2676 719 MobiDBLite consensus disorder prediction 174 199 - -
Hepe08g2676 719 Pfam Universal stress protein family 19 154 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0791 Hepe-Chr8:7089044 Hepe08g2676 Hepe-Chr8:68800887 5.45e-83 dispersed
Hepe08g2061 Hepe-Chr8:57864274 Hepe08g2676 Hepe-Chr8:68800887 2.00e-110 dispersed
Hepe08g2676 Hepe-Chr8:68800887 Hepe10g0326 Hepe-Chr10:3479889 1.08e-124 dispersed
Hepe06g1389 Hepe-Chr6:64096367 Hepe08g2676 Hepe-Chr8:68800887 8.66e-120 transposed
Hepe09g0232 Hepe-Chr9:2040158 Hepe08g2676 Hepe-Chr8:68800887 2.01e-09 transposed
Hepe03g1449 Hepe-Chr3:71271991 Hepe08g2676 Hepe-Chr8:68800887 4.45e-128 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73098 PF07714 PK_Tyr_Ser-Thr 2.80E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2676 - - - 0.0