Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2693 ATGAGTGGAAGAAACAGGTTTCCATTCACTGCAACTCAGTGGCAAGAGCTGGAGCACCAAGCTCTCATCTTCAAATACATGGTCTCTGGCATCCCTGTTCCTCCTGATCTGCTCTTCACCATTAAGAGAACAACCTCTTTGGATTCTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGATGTTGGATGGAACTACTTGCAAATGGGTTCGGGGAGGAAAATCGATCCAGAGCCAGGAAGGTGCAGAAGAACAGACGGCAAGAAATGGAGATGCTCCAAAGAAGCTTACCCAGATTCTAAGTACTGTGAGAGACATATGCACAGAGGCAAGAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACATCAACAATAACAACAAATGCTCTAATAAACTCTAATCCATCCACCCCAGCCATTTCTTCCATCACCCAAAACTCAACTCATTCCCTTCCTTCACTCACCAACTCATTTCCCTCTGAAACTAATAGCCAAAACCTCCACCATTCCTACTTCAATACTCATCCTCCCCACCCTTCTCTCTATCAACATGGCTCTTCTTCTAGGCCCCCTGGGTCTGGTCATCTGCAGCAAAACTCCAACTCCTCCTTGCTTCTGGACCCAGCTTCTTACTCCCACAACAACCCTGATTACAGAAACAGGTATGTTTATGGTGTGAAGGAAGATGTTGATGAACATCCCTTTCTGTCGGAAGAACACTCTGGGAACAACATGAGAGGCTTCTCTACTTCGTCTATGGAAGATTCCAGCTGGCAGCTAACTCCTCTGACAATCAGTTGCTCTTCCTCTTCCAGAAACAAGAACTGCTCTGCTTTACAAGGTGACTACTCTTCTTACTTGCAGCTTCAGAGCTTTGGAGATTCCCCCAAGCAACTCAAGCAAGAGGATCATTACTATTCGCTGCAGAGCAAGATGGAAGGAGATGAACCACAGAAGACTATGCATCACTTCTTTGATGAATGGTCTCCTAAAGACAGAGGATCTTGGCTTGATTTGGATGATAAGTCATCCAATAATACTCGGCTTTCAATGTCTATTCCTAACTCATCACAACATGACTTCTCCTCCTTCTTCAGTTCCAATAAGCATAATGAAAACTGA 1131 44.65 MSGRNRFPFTATQWQELEHQALIFKYMVSGIPVPPDLLFTIKRTTSLDSPFISRLFPHQYPDVGWNYLQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTSTITTNALINSNPSTPAISSITQNSTHSLPSLTNSFPSETNSQNLHHSYFNTHPPHPSLYQHGSSSRPPGSGHLQQNSNSSLLLDPASYSHNNPDYRNRYVYGVKEDVDEHPFLSEEHSGNNMRGFSTSSMEDSSWQLTPLTISCSSSSRNKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYSLQSKMEGDEPQKTMHHFFDEWSPKDRGSWLDLDDKSSNNTRLSMSIPNSSQHDFSSFFSSNKHNEN 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 68954490 68955847 - Hsped.08g26930.1 Hepe08g2693 578665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2693 376 MobiDBLite consensus disorder prediction 132 215 - -
Hepe08g2693 376 SMART QLQ_2 7 43 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Hepe08g2693 376 Pfam QLQ 8 41 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Hepe08g2693 376 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Hepe08g2693 376 Pfam WRC 78 120 IPR014977 -
Hepe08g2693 376 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Hepe08g2693 376 PANTHER GROWTH-REGULATING FACTOR 5 3 360 IPR031137 GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro)
Hepe08g2693 376 MobiDBLite consensus disorder prediction 350 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1533 Hepe-Chr2:20272697 Hepe08g2693 Hepe-Chr8:68954490 5.09e-60 dispersed
Hepe08g1128 Hepe-Chr8:11328023 Hepe08g2693 Hepe-Chr8:68954490 4.40e-48 dispersed
Hepe08g1351 Hepe-Chr8:15641797 Hepe08g2693 Hepe-Chr8:68954490 1.56e-33 dispersed
Hepe08g2693 Hepe-Chr8:68954490 Hepe09g0912 Hepe-Chr9:9131529 6.13e-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56295 PF08879 WRC 7.90E-21 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2693 - - - 0.0