Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2707 ATGGCCGCTGTTCGAATTGTGTTCCTCTTCCGCCTCATCCTACTCATCATCGCCGCTCATTCCCAGACCGAGAATGAGGCCCTCCTCAGGCTCAAGCAATCCTTCACCCACGCCGAATCCCTCAACTCCTGGATTCCTAACTCCGTTCCCTGCGCCGCTCGATGGACCGGCATCATCTGCAACAAAGGCGTCATCACCGGCCTCCATCTCACCGGCCTCCAGCTCTCCGGCAAGATCGACATCGAAGCCATCCTCGAGCTCCGCAACCTCCGTACCGTCAGCTTCGTCAACAACAGCTTCTCCGGCCCCATTCCCGAATTCAACAGAATCGGCGTTCTCAAGTCCCTCCTCCTCACCGGGAACGACTTCTCCGGCGTCATCCCTCCCGATTTCTTCTCCTCCCTCACCTCCCTCAAGAAGGTCTGGCTCTCCTTCAACAAGTTCTCCGGCAACATTCCCCACTCTCTCGCCCTACTCACCCATCTAATCGAGCTCCACCTGGAGGCCAACGAGTTCACGGGGCCGATCCCCCACCTCAAACAGGCCGCCTCCATAACCTCCATCGATTTCTCCAACAACAAGCTCGAGGGACAGATTCCGGAGATCCTGTCCAATTTCGACCCCAAGGCATTCTCCGGGAACGACGCCCTGTGCGGGAAGCCACTCCCCAAGTCGTGCTCGGAAATTACTCCGCCGTCCCCTCCTCCCGGGGAGTCCCAGGGTAACGTGTCCAAATTAGTAGTGGCCTCCTTGATAGCGGTGGCCGTGTTTCTGATGGTGTTTATATTTCTGAGCGCGTCGAAGAGGAGAGAGGAGGAGTTCAGTATGTTGGGGAGGGAGAATATGAACGAGGTGGTGGAGGTGCATGTGCCACATGATAAGCAGTCGAGCAGAAGAGGCGGAGGAGTCGGCGGGGAGTCGAGGAGAGGGATGCAGGCAGGGGGGAAGGCGGGGATGAGTGATCTTGTGGTGGTGAATGATGAGAAGGGCTCGTTTGGGCTGGCGGATTTGATGAAGGCTGCGGCTGAGGTGCTCGGAAATGGTGGGTTGGGCTCAGCCTACAAGGCGGTCATGTCCAACGGACTGTCGGTGGTGGTGAAGAGAATAAGAGAAATGAACAAGTTAGGGAAGGATGGGTTCGATGCAGAGATGAGGCGCCTTGGAAAACTGCGTCATCATAACATACTGACGCCTTTGGCCTTCCATTACAGGAGAGAGGAGAAGCTGCTGGTGTCCGAGTACATGGCAAAGGGTAGCCTCTTGTATGTGTTGCATGGTGACCGTGGAAGCTGCCACGCTGAGCTTAACTGGAGCACTCGGCTAAAGATTGTGAAAGGGATAGCGAGGGGAATGGGATTCCTCCATACAGAATTCGCAACCTACGATCTGCCACATGGGAATCTGAAATCAAGCAACGTTCTTCTAAGCGACAACTACGAGCCACTTCTGAACGACTACGCCTTTCATCCATTAGTGAATCCGAGCAATGCGAGTCAAGCAATGTTTGCTTACAGATCCCCTGAGTACACCCAATACCAAGAAATCTCTCCCAAGTCCGATGTGTATTGCCTTGGAATTATCATCCTTGAGATACTCACCAGCAAATTCCCTTCTCAATATCTCACCAACGGCAAGGGCGGCACCGACGTCGTCCAGTGGGTCTCCTCCGCCGTCTCCGAGAAGAGGGAGGCTGAGCTCATCGACCCCGAGATTGCAAACGACACCGCCGCTATCGATCGCATGGTTGCCCTCCTCCGAATTGGCGCGGATTGCACCCAAAGCACTTCTCAGCAACGGCCAGACATGAAGGAGGCCATTAGGAGAATAGAAGAAATATGA 1839 55.03 MAAVRIVFLFRLILLIIAAHSQTENEALLRLKQSFTHAESLNSWIPNSVPCAARWTGIICNKGVITGLHLTGLQLSGKIDIEAILELRNLRTVSFVNNSFSGPIPEFNRIGVLKSLLLTGNDFSGVIPPDFFSSLTSLKKVWLSFNKFSGNIPHSLALLTHLIELHLEANEFTGPIPHLKQAASITSIDFSNNKLEGQIPEILSNFDPKAFSGNDALCGKPLPKSCSEITPPSPPPGESQGNVSKLVVASLIAVAVFLMVFIFLSASKRREEEFSMLGRENMNEVVEVHVPHDKQSSRRGGGVGGESRRGMQAGGKAGMSDLVVVNDEKGSFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRIREMNKLGKDGFDAEMRRLGKLRHHNILTPLAFHYRREEKLLVSEYMAKGSLLYVLHGDRGSCHAELNWSTRLKIVKGIARGMGFLHTEFATYDLPHGNLKSSNVLLSDNYEPLLNDYAFHPLVNPSNASQAMFAYRSPEYTQYQEISPKSDVYCLGIIILEILTSKFPSQYLTNGKGGTDVVQWVSSAVSEKREAELIDPEIANDTAAIDRMVALLRIGADCTQSTSQQRPDMKEAIRRIEEI 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 69059268 69061273 - Hsped.08g27070.1 Hepe08g2707 578679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2707 612 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 612 IPR046959 -
Hepe08g2707 612 Gene3D Ribonuclease Inhibitor 21 178 IPR032675 -
Hepe08g2707 612 MobiDBLite consensus disorder prediction 292 313 - -
Hepe08g2707 612 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Hepe08g2707 612 SUPERFAMILY L domain-like 21 206 - -
Hepe08g2707 612 FunFam Nuclear pore complex protein NUP107 21 178 - -
Hepe08g2707 612 Pfam Leucine Rich Repeat 137 157 IPR001611 GO:0005515(InterPro)
Hepe08g2707 612 Pfam Leucine Rich Repeat 184 206 IPR001611 GO:0005515(InterPro)
Hepe08g2707 612 Pfam Leucine Rich Repeat 113 132 IPR001611 GO:0005515(InterPro)
Hepe08g2707 612 Pfam Protein kinase domain 343 605 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2707 612 FunFam Pollen receptor-like kinase 1 415 612 - -
Hepe08g2707 612 Gene3D Ribonuclease Inhibitor 179 229 IPR032675 -
Hepe08g2707 612 Gene3D Transferase(Phosphotransferase) domain 1 415 612 - -
Hepe08g2707 612 Gene3D Phosphorylase Kinase; domain 1 311 414 - -
Hepe08g2707 612 ProSiteProfiles Protein kinase domain profile. 339 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2707 612 SUPERFAMILY Protein kinase-like (PK-like) 343 608 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2707 Hepe-Chr8:69059268 Hepe10g0328 Hepe-Chr10:3500293 6.69e-93 dispersed
Hepe08g2707 Hepe-Chr8:69059268 Hepe09g0414 Hepe-Chr9:3727277 1.76e-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73101 PF00069 Pkinase 8.40E-27 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2707 K28077 - csv:101215919 984.556