Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0005 ATGGATCCAGAAGCCCTCTCCGCAACTTTGTTCAAATGGGATCCTCGAGGAATTGTAGGCGGGGGAGGCGGCGCACCCCAGCTCCCAGCACCACTACCACCGCCCTACTCGGTGCGACCGAGGGAGTTGGGACTGGGTGGCCTGGAGGACTTGTTCCAGGCTTACGGTATCAGGTACTACACCGCCGCTAAAATTGCTGAACTTGGATTCACGGTCAGCACACTCCTGGACATGAAAGACGAAGAGTTGGAGGAGATGATGAACAGTCTGTCTCACATTTTCCGGTGGGAGCTTCTGGTGGGTGAGAGGTACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTGTAGATGAGGAGATGGAGTCCACCAGACGCCGTCACCTCTTGTCCAACGACACCACTACCAACCTGGTCCTCGATGCCCTTTCTCAGGAAGGGCTTTCGGAAGAGCCGGTGCAGCAGGAGAAGGAAGTAGTGGGGAGCGGGGGAGGAGGAGCGTGGGAGGCAGTTGCAGCAGCAGCCGAGATGAGGAAGAAGCAGCGGAGGAGAAACGGATCAAAGAAGAAGCAGGTGATGGCGATGGAGGCCGAGGATCACGATGAAAACGATCAGGCAGTTGGGGACGATGAGGAGAATTTAGAAGTGAGCGAGAGACAGCGGGAGCATCCATTCATAGTAACAGAGCCAGGGGAGGTTGCACGCGGAAAGAAGAACGGCCTCGACTATCTCTTCCACCTCTACGAGCAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGTCCCACTAAGGTGACGAACCAGGTTTTTAGATATGCTAAGAAGGCGGGAGCAAGTTACATAAACAAGCCTAAAATGAGACACTACGTGCACTGCTATGCGCTTCATTGTCTGGACGAGGAAGCATCGAACGCATTGAGAAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGAGACAGGCATGCTATAAGCCACTGGTAGCCATAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTATGTGCCTACCAAACTCCGCCAACTCTGCCACGCCGAGCGCAACACTGCCGCCACACCTTCCTCCACCTCCGCCGATCACTTGCCTTTTTAA 1173 54.31 MDPEALSATLFKWDPRGIVGGGGGAPQLPAPLPPPYSVRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEEMMNSLSHIFRWELLVGERYGIKAAVRAERRRVDEEMESTRRRHLLSNDTTTNLVLDALSQEGLSEEPVQQEKEVVGSGGGGAWEAVAAAAEMRKKQRRRNGSKKKQVMAMEAEDHDENDQAVGDDEENLEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNTAATPSSTSADHLPF 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 80483 82542 + Hsped.09g00050.1 Hepe09g0005 578689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0005 390 PANTHER PROTEIN LEAFY 1 384 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe09g0005 390 Coils Coil 107 127 - -
Hepe09g0005 390 Gene3D Protein LEAFY 216 384 IPR038276 -
Hepe09g0005 390 Pfam Floricaula / Leafy protein SAM domain 45 121 IPR035079 -
Hepe09g0005 390 MobiDBLite consensus disorder prediction 178 218 - -
Hepe09g0005 390 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 216 378 IPR035209 GO:0003677(InterPro)
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56297 PF17538 C_LFY_FLO 1.90E-108 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0005 - - - 0.0