Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0006 ATGGCTCAGGTTTCTCAGTTGCCTTGCGACGGCGATGGCATTTGCATGCTCTGCAAGGCCAAGCCTTCCGACTTGGAGACGATCACTTGCAAAACCTGCGTCACCCCTTGGCACGTCGGTTGTCTCTCAAATCCCCTTGAAACCCTGGCTTCTACCCTTCAATGGGACTGTCCCGACTGTTCCCCCCCTCCCGAAGATGTTCCCCTTCCTCCTCTCCCCATTGCGCCTTCTAGTGACCTGGTCGCTGCGATTCGAGCCATTGAGGCCGATGCCTCCCTTACTGACCGCGAGAAGGCAAAAAAACGCCAGGAGCTTCTCAGCGGGAAGTCTCAGTCCGATGCCAACGATGAAACGACAAAAAGGGGAGACGATGTTTTGAATTTGTTCGACGAGAGATTGAACTGCTCCTTCTGCATGCAGTTACCAGAAAGACCAGTCACTACTCCGTGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGCCGCTGCGTGATACCCTCCAAAATGGCTAGCCAGCCCCGTATTAATTCGGCACTTGTAGTGGCCATTCGTATGGCTAAGTTGTCAAAATCTGTTTCTGGAGGACCTCAGAAGGTTTATCATTTTGTCCACAATCAAAATAGACCAGATAAAGCCTATACCACTGACCGGGCACAAAAAAAAGGGAAAGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCCTGCTGAAAATGATCCTGAGAGAAACCAGGGTGTTCTGGTTGGTGAATGCTGGGAGGATAGGCTAGAATGTCGTCAATGGGGTGCTCACTTTCCACATGTTGCAGGCATAGCGGGACAGTCAAATAATGGTGCACAATCAGTGGTTCTTTCTGGTGGCTACCAGGATGATGAAGATCATGGGGAGTGGTTCCTCTACACTGGAAGTGGGGGTCGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAGTCCTTTGACCAGAAATTTGAAAAATCAAACAAAGCGCTACAAGTTAGTTGCTTGAAAGGTTATCCTGTTAGGGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCATATCCTCCAGAGAAGGGATTGCGGTATGATGGAGTTTACAGGATTGAGAAGTGTTGGCGTAAAGTGGGAGTTCAGGGCTTTAAGGTATGTCGGTATTTATTTGTTAGATGCGACAATGATCCTGCTCCATGGACAAGCGATGAACATGGAGATCGACCTAGACCCTTACCTGCAATTCCAGAATTGAAAAAAGCAACAGATATTACGGAGAGGAAGGAAGGGCCATCATGGGACTTTGATGAGAAAGATAGTCGGTGGAAGTGGAGCAAAGCTCCACCAACGAGCAAGAGACCAGTTGAAACCGAAGATTCTGCTTCTGGGAAGAGGTCAAGGAGAAAAATTAGGCAATCACATAATACGAATGTCCGAGAAAAATTATTGAAAGAGTTTAGCTGCCTTATTTGCCGGGAGGTGATGAGTTTTCCAATTACTACACCTTGTGCCCATAACTTTTGCAAGTCATGCTTGGAAGGTGCCTTTGTGGGCAAGACATTCATGAGAGAGAGAAGCAGTGGTGGACGGTCTCTTAGATCCCAAAAGAATGTCATGGCTTGTCCTTGTTGCCCGACAGATATATCTGATTTTCTACAAAATCTTCAGGTAAATAGAGAGTTGTTGGATGTGATCGAGTCGTTGAAAAGTAAGATTGAAGAAGAAGGGGAGAAGCAGCTCTGTGGAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAAGATAGTAAGCGAGCAAAGGTGGAGGTGGTGGTGGTGGTTAATGGTGTGGAGGAAAATGATGCATCTGAGAAGCTCTGTGAAGAAAAAGATATAGATGAGGGAAAAGATGGAAGCAGCAGTCCTCCTGTGGAAACAAGAAAGCGTACAAAGGTGGTGGTGGTGGTTAATGGCCATGTGGATGATGTGGAATGA 2028 46.79 MAQVSQLPCDGDGICMLCKAKPSDLETITCKTCVTPWHVGCLSNPLETLASTLQWDCPDCSPPPEDVPLPPLPIAPSSDLVAAIRAIEADASLTDREKAKKRQELLSGKSQSDANDETTKRGDDVLNLFDERLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKNTCAKCRCVIPSKMASQPRINSALVVAIRMAKLSKSVSGGPQKVYHFVHNQNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKALQVSCLKGYPVRVVRSHKEKRSSYPPEKGLRYDGVYRIEKCWRKVGVQGFKVCRYLFVRCDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKEGPSWDFDEKDSRWKWSKAPPTSKRPVETEDSASGKRSRRKIRQSHNTNVREKLLKEFSCLICREVMSFPITTPCAHNFCKSCLEGAFVGKTFMRERSSGGRSLRSQKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKIEEEGEKQLCGEEEEEEEEEEGKDSKRAKVEVVVVVNGVEENDASEKLCEEKDIDEGKDGSSSPPVETRKRTKVVVVVNGHVDDVE 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 94589 100390 + Hsped.09g00060.1 Hepe09g0006 578690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0006 675 SUPERFAMILY RING/U-box 127 181 - -
Hepe09g0006 675 Pfam SAD/SRA domain 264 413 IPR003105 -
Hepe09g0006 675 SMART G9a_1 257 414 IPR003105 -
Hepe09g0006 675 ProSiteProfiles Zinc finger RING-type profile. 135 174 IPR001841 -
Hepe09g0006 675 MobiDBLite consensus disorder prediction 418 492 - -
Hepe09g0006 675 ProSitePatterns Zinc finger PHD-type signature. 15 60 IPR019786 -
Hepe09g0006 675 ProSitePatterns Zinc finger RING-type signature. 521 530 IPR017907 -
Hepe09g0006 675 SMART PHD_3 14 61 IPR001965 -
Hepe09g0006 675 SMART ring_2 135 173 IPR001841 -
Hepe09g0006 675 SMART ring_2 506 562 IPR001841 -
Hepe09g0006 675 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 233 428 - -
Hepe09g0006 675 ProSiteProfiles YDG domain profile. 262 410 IPR003105 -
Hepe09g0006 675 MobiDBLite consensus disorder prediction 98 120 - -
Hepe09g0006 675 MobiDBLite consensus disorder prediction 632 655 - -
Hepe09g0006 675 SUPERFAMILY RING/U-box 499 587 - -
Hepe09g0006 675 MobiDBLite consensus disorder prediction 632 662 - -
Hepe09g0006 675 SUPERFAMILY PUA domain-like 236 431 IPR015947 -
Hepe09g0006 675 Coils Coil 576 596 - -
Hepe09g0006 675 CDD RING-HC_ORTHRUS_rpt1 131 178 IPR047498 -
Hepe09g0006 675 SUPERFAMILY FYVE/PHD zinc finger 7 72 IPR011011 -
Hepe09g0006 675 ProSiteProfiles Zinc finger RING-type profile. 506 562 IPR001841 -
Hepe09g0006 675 Pfam Zinc finger, C3HC4 type (RING finger) 135 173 IPR018957 GO:0046872(InterPro)
Hepe09g0006 675 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 3 612 IPR045134 GO:0010216(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER)
Hepe09g0006 675 Pfam RING-type zinc-finger 506 535 IPR027370 -
Hepe09g0006 675 ProSiteProfiles Zinc finger PHD-type profile. 12 63 IPR019787 -
Hepe09g0006 675 MobiDBLite consensus disorder prediction 594 616 - -
Hepe09g0006 675 MobiDBLite consensus disorder prediction 418 464 - -
Hepe09g0006 675 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 86 202 - -
Hepe09g0006 675 Gene3D - 233 429 IPR036987 -
Hepe09g0006 675 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 201 IPR013083 -
Hepe09g0006 675 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 461 593 IPR013083 -
Hepe09g0006 675 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 61 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0006 Hepe-Chr9:94589 Hepe05g0762 Hepe-Chr5:17166628 2.65e-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0006 K10638 - csv:101220457 1095.88