Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0007 | ATGCATGGGAAGAGACCCTTTGAAGAATCGGAGGAGGTGGAAGAAGAAAACCCGTTCCCGATCTACTCAGCTAGATCCGAACATGACACGTCGGTCATGGTTTCTGCGCTAGCTCAAGTGATCGGTAGCAGAAGCTCAGAAGCAAACCCTAGAAGTAGAACAACAACAAATGATCAAGAGCAGCAGCAACAGCAGCAGCAGGAGGTGACGATCAAAAGAGTACATTATCGAGGAGTAAGGCAGAGACCTTGGGGAAAATGGGCAGCTGAGATTCGTGACCCGAAAAAGGCAGCAAGAGTTTGGCTGGGGACCTTCGACACTGCTGAGGCTGCGGCAATTGCTTACGATGAAGCTGCCCTCAGATTCAAGGGAACCAAAGCCAAGCTCAACTTCCCTGAGAGACTATTATTCATCCAACAGCAACATCTTCATCACACTTCTTCTTCGTCGTCATCGTCATCGTCTTCCTCCTTCTCCACTTCTCATCATCAACAGTACCAGTACCAGTACCAGCCTCCTCCTCCTTAA | 528 | 49.24 | MHGKRPFEESEEVEEENPFPIYSARSEHDTSVMVSALAQVIGSRSSEANPRSRTTTNDQEQQQQQQQEVTIKRVHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDEAALRFKGTKAKLNFPERLLFIQQQHLHHTSSSSSSSSSSSFSTSHHQQYQYQYQPPPP | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 100972 | 102145 | - | Hsped.09g00070.1 | Hepe09g0007 | 578691 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0007 | 175 | PANTHER | DNA-BINDING DOMAIN | 47 | 160 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Hepe09g0007 | 175 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Hepe09g0007 | 175 | MobiDBLite | consensus disorder prediction | 39 | 70 | - | - | |
Hepe09g0007 | 175 | SUPERFAMILY | DNA-binding domain | 75 | 133 | IPR016177 | GO:0003677(InterPro) | |
Hepe09g0007 | 175 | Gene3D | AP2/ERF domain | 74 | 134 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe09g0007 | 175 | CDD | AP2 | 75 | 133 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe09g0007 | 175 | SMART | rav1_2 | 75 | 138 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe09g0007 | 175 | MobiDBLite | consensus disorder prediction | 142 | 168 | - | - | |
Hepe09g0007 | 175 | PRINTS | Ethylene responsive element binding protein signature | 76 | 87 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe09g0007 | 175 | PRINTS | Ethylene responsive element binding protein signature | 98 | 114 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe09g0007 | 175 | FunFam | Ethylene-responsive transcription factor 2 | 74 | 133 | - | - | |
Hepe09g0007 | 175 | ProSiteProfiles | AP2/ERF domain profile. | 75 | 132 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe09g0007 | 175 | MobiDBLite | consensus disorder prediction | 142 | 175 | - | - | |
Hepe09g0007 | 175 | Pfam | AP2 domain | 75 | 124 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0471 | Hepe-Chr7:4856866 | Hepe09g0007 | Hepe-Chr9:100972 | 5.13e-26 | dispersed | |
Hepe09g0007 | Hepe-Chr9:100972 | Hepe10g0773 | Hepe-Chr10:14522157 | 3.97e-31 | dispersed | |
Hepe03g1176 | Hepe-Chr3:65457065 | Hepe09g0007 | Hepe-Chr9:100972 | 1.99e-36 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56298 | PF00847 | AP2 | 8.90E-15 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0007 | - | - | - | 0.0 |