Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0045 ATGGATAGCAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCCGTTCCGGCCCCTCCCTTCCACCACCTCCTCCAGCAGCAGCAACAGCAACTCCAGATGTTCTGGTCCTTTCAACGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGACGAGGACGTCCGTATGATCTCCGCCGAGGCCCCCATTTTGTTCGCCAAGGCCTGCGAACTCTTCATTCTTGAACTCACTATTAGGTCATGGCTCCACGCCGAAGAGAATAAGAGGCGGACATTGCAGAAGAACGATATTGCGGCGGCCATCACCAGGACTGATATCTTTGATTTCTTGGTTGATATTGTTCCTAGGGATGAGATCAAGGACGAGGCTGGCTTGGGAGGCATGGCCGGAGCTACTGCTAGTGGAATGCCTTACTACTATCCACCTATGGGCCAACCGGCCGGGCCTCCCGGAGGGATGATGATTGGGAGACCGGCAATGGATCCAACCGGAGTTTACGCCCAGCCACCGTCGCAGGCGTGGCAATCGGTCTGGCAGACCGCGGCGGAGGACGGTTCTTACGCTAGTGGGGGCAGCAGCGGGCATGGCAATCTTGATGGTCAGAGATAA 663 55.2 MDSNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMAGATASGMPYYYPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGHGNLDGQR 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 366379 371356 + Hsped.09g00450.1 Hepe09g0045 578729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0045 220 Pfam Core histone H2A/H2B/H3/H4 48 119 IPR007125 GO:0003677(InterPro)
Hepe09g0045 220 FunFam Nuclear transcription factor Y subunit gamma 25 134 - -
Hepe09g0045 220 SUPERFAMILY Histone-fold 30 128 IPR009072 GO:0046982(InterPro)
Hepe09g0045 220 MobiDBLite consensus disorder prediction 1 23 - -
Hepe09g0045 220 Gene3D Histone, subunit A 24 134 IPR009072 GO:0046982(InterPro)
Hepe09g0045 220 MobiDBLite consensus disorder prediction 198 220 - -
Hepe09g0045 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 32 140 IPR050568 GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0760 Hepe-Chr7:9139025 Hepe09g0045 Hepe-Chr9:366379 3.57e-29 dispersed
Hepe09g0045 Hepe-Chr9:366379 Hepe09g1825 Hepe-Chr9:57828189 1.21e-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56302 PF00808 CBFD_NFYB_HMF 2.20E-17 CL0012 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0045 - - - 0.0