Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0061 ATGGCGGCCAGTAGTTCTGCAGCACCCACCTTAGAACATATCCCCTCCATTGATCTCATGTCGGAGCTCCTCCGTCGCATGAAATGCGCTTCAAAACCCGACAAACGCCTCATTCTCATCGGTCCACCTGGATCAGGAAAAGGCACCCAATCTCCAATTATCAAGGATGAATACTGCTTGTGTCACTTGGCCACGGGTGATATGTTAAGAGCTGCTGTTTCTGCTAAAACTCCACTTGGTGTTAAGGCTAAGGAGGCCATGGACAAGGGTGAACTTGTGTCTGATGACTTGGTTGTTGGCATCATAGATGAAGCAGTCAAGAAGCCTTCATGTCAGAAAGGTTTCATTCTTGATGGGTTTCCTAGAACAGAGGTCCAAGCACAGAAGCTGGATGAGATGCTAGAAAAGCAGGGTGTTAAAATTGATAAGGTGCTTAATTTTTCCATTGATGATTCGATCTTGGAGGAGAGGATTACAGGACGATGGATACACCCATCCAGCGGAAGATCTTACCACACAAAATTTGCTCCTCCTAAGGTTGCTGGTGTTGATGATGTCACTGGAGAATCTTTGATTCAACGTAAGGATGATACTGCAGCAGTTCTCAAATCTCGACTAGAGGCTTTCCACAAGCAAACAGAGCCGGTGATTGATTACTATTCCAAGAAGAAAATTGTCGCAGATCTTCAAGCAGAGAAGCCTGCCAAACAGGTAACAGAACAGATTGAGAAAGTGCTGTCATCCTAG 747 45.52 MAASSSAAPTLEHIPSIDLMSELLRRMKCASKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVSAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAVKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGVKIDKVLNFSIDDSILEERITGRWIHPSSGRSYHTKFAPPKVAGVDDVTGESLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKKIVADLQAEKPAKQVTEQIEKVLSS 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 518691 521216 + Hsped.09g00610.1 Hepe09g0061 578745

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0061 248 NCBIfam adenylate kinase 36 246 IPR006259 GO:0004017(InterPro)|GO:0005524(InterPro)|GO:0016776(InterPro)
Hepe09g0061 248 FunFam Adenylate kinase mitochondrial 35 248 - -
Hepe09g0061 248 Pfam Adenylate kinase 39 224 - -
Hepe09g0061 248 Hamap Adenylate kinase [adk]. 35 247 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 246 IPR027417 -
Hepe09g0061 248 PRINTS Adenylate kinase signature 211 225 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 PRINTS Adenylate kinase signature 38 51 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 PRINTS Adenylate kinase signature 115 131 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 PRINTS Adenylate kinase signature 66 80 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 PRINTS Adenylate kinase signature 194 209 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 Pfam Adenylate kinase, active site lid 161 196 IPR007862 GO:0004017(InterPro)
Hepe09g0061 248 Gene3D - 8 247 IPR027417 -
Hepe09g0061 248 CDD ADK 36 238 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Hepe09g0061 248 ProSitePatterns Adenylate kinase signature. 115 126 IPR033690 -
Hepe09g0061 248 PANTHER NUCLEOTIDE KINASE 31 245 IPR000850 GO:0004017(PANTHER)|GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006139(InterPro)|GO:0019205(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0061 K00939 - - csv:101216714 447.203
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2132 Hepe-Chr7:65649656 Hepe09g0061 Hepe-Chr9:518691 5.62e-155 dispersed
Hepe08g2477 Hepe-Chr8:65829712 Hepe09g0061 Hepe-Chr9:518691 1.42e-40 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g143 . . Bda06g00737 . . . . Bma12g01075 . Cmo18g00202 . . Car10g00061 . . . . Bhi02g00537 . . . Hepe09g0061 . . . . . . . . . Cone2ag0964 Cone16ag0028 . Cone19ag0199 Lsi02g00488 Csa01g00950 Chy12g01181 Cme12g01602 . Blo15g00217 Bda11g01817 . Bpe07g00882 . . . . . . . . . Car18g00219 Cpe09g00971 . Bhi08g01461 . . . . . . Cla03g00344 Cam03g0360 . Cco03g0365 Clacu03g0361 Cmu03g0966 Cre03g0659 . Csa01g00069 Chy02g02651 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003681 2 2 1 2 2 1 2 0 0 2 1 1 1 2 2 2 1 2 2 1 2 2 2 2 2 0 2 2 1 2 46