Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0063 ATGGCGAAGGCAAATAATGGTGAAGGCAATAATTCGGTAGTCTCTGATTTTATCGACTTCTTGAACGCTTCCCCCACTGCTTTCCACGCCGTTGAGGAGGCAAAGAAGCGTCTGGTAGGAGTGGGATATGAACAACTCTCTGAAACAGAGGATTGGAAATTAGAAGCCGGCAAGAAGTACTTCTTCACCAGAAATCATTCTACTATTCTCGCTTTTGCGATCGGTAAAAAATACGTTGCTGGAAATGCATTTCATATTGTTGGTGCTCATACTGATAGCCCTTGTTTAAAATTGAAACCTATAAGCAAGATTACAAAGGGTGGATTTCTGGAAGTTGGTGTTCAAATATATGGGGGTGGGTTGTGGCACACATGGTTTGATCGGGATTTAACAATTGCAGGAAGGGTGATTCTAAGGGAAGAAAATAATGGTTCTGTTTCATATGTTCATCGACTTGTTCGAATTTTGGAGCCCATATTGAGAGTTCCTACACTAGCAATTCACTTGGATAGGGATGCAGTTGCATTTGCAGTGAACACAGAGACCCAACTTCTCCCTATTTTGGCAACAACTATTAAGGGGGAATTGAATAAAGTTGTTTCCAAAAATGATGCCCAAAATGGAGGAGAGAAAACAGATCAGAAATCAACTCCTACTAGCTCAAAGCATCACTTGCTTCTATTACAGCTACTTGCCGAGCAACTTGGCTGTGAACCAGATGACATATTTGATTTTGACTTGCAAGTATGTGATGCTCAACCAAGTGTGATTGGTGGCGCCAAGAGGGAATTCATTTTCTCTGGAAGGCTCGATAATTTATGCATGACATTTTGCTCTTTGAAGGCACTGATTGACAGTACATCTTCTGAAAGTAGCCTTGCGAATGAGCCCGGTATCAGAATGGTGGCCTTGTTCGACAATGAGGAGGTTGGATCTAATTCAGCCCAGGGGGCTGGGTCTCCAACAATGCTTGATGCTTTATCACGAATTACGACTTCCTTCAGCTCATACCCTTCGGTATAA 1023 42.42 MAKANNGEGNNSVVSDFIDFLNASPTAFHAVEEAKKRLVGVGYEQLSETEDWKLEAGKKYFFTRNHSTILAFAIGKKYVAGNAFHIVGAHTDSPCLKLKPISKITKGGFLEVGVQIYGGGLWHTWFDRDLTIAGRVILREENNGSVSYVHRLVRILEPILRVPTLAIHLDRDAVAFAVNTETQLLPILATTIKGELNKVVSKNDAQNGGEKTDQKSTPTSSKHHLLLLQLLAEQLGCEPDDIFDFDLQVCDAQPSVIGGAKREFIFSGRLDNLCMTFCSLKALIDSTSSESSLANEPGIRMVALFDNEEVGSNSAQGAGSPTMLDALSRITTSFSSYPSV 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 533556 538209 - Hsped.09g00630.1 Hepe09g0063 578747

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0063 340 SUPERFAMILY Aminopeptidase/glucanase lid domain 96 248 - -
Hepe09g0063 340 Pfam Aminopeptidase I zinc metalloprotease (M18) 20 334 IPR001948 GO:0004177(InterPro)|GO:0006508(InterPro)|GO:0008270(InterPro)
Hepe09g0063 340 Gene3D Aminopeptidase i, Domain 2 97 253 IPR023358 GO:0004177(InterPro)
Hepe09g0063 340 SUPERFAMILY Zn-dependent exopeptidases 11 335 - -
Hepe09g0063 340 Gene3D Zn peptidases 5 96 - -
Hepe09g0063 340 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 305 323 IPR001948 GO:0004177(InterPro)|GO:0006508(InterPro)|GO:0008270(InterPro)
Hepe09g0063 340 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 156 173 IPR001948 GO:0004177(InterPro)|GO:0006508(InterPro)|GO:0008270(InterPro)
Hepe09g0063 340 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 117 137 IPR001948 GO:0004177(InterPro)|GO:0006508(InterPro)|GO:0008270(InterPro)
Hepe09g0063 340 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 84 100 IPR001948 GO:0004177(InterPro)|GO:0006508(InterPro)|GO:0008270(InterPro)
Hepe09g0063 340 FunFam Aspartyl aminopeptidase 1 95 254 - -
Hepe09g0063 340 PANTHER ASPARTYL AMINOPEPTIDASE 8 335 IPR001948 GO:0004177(InterPro)|GO:0006508(InterPro)|GO:0008270(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0063 K01267 - - csv:101216946 603.594
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0062 Hepe-Chr9:526142 Hepe09g0063 Hepe-Chr9:533556 7.73e-194 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g144 . Blo16g00264 . . . . . . . . . Cma11g00045 . Car11g00040 . . Cpe04g01605 Bhi02g00539 . . . Hepe09g0063 . . Cla06g01730 Cam06g1921 Cec06g1971 Cco06g1975 Clacu06g1877 Cmu06g1819 Cre06g2634 . Cone16ag0029 . . . . . . . . . . . Bpe15g00210 Bma03g01265 . . . Cmo11g00046 . . . . . . . . . . . . . . . . . . . . Lsi06g01628 Csa01g00070 Chy02g02650 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003516 0 2 1 1 1 2 1 2 2 2 1 2 1 1 1 2 2 2 1 2 2 1 2 2 1 2 2 4 1 1 47