Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0092 ATGGCAATCAGAAAGAACAACTTCTTTTTGGCTGCGCAGGAATCTTCCTGGAAATTAACCATCGCCAAAGCTCTTGTAATTTGTGAAGTGATGGGTGGGAAAAGTTCTAAGCATGGAAGTTCAAGACGCAATTCGTCTAGTCGGTCTCACTCGCAGCAGCGGAGTCGTTACGGTTATTCTGAGTCGCCATATACTCAACCAAGAAACACGCCACAGTATCAGTATGCACCTCCAACTCCAGGCTATGGTGGAACTCAGGCCCCTGAAACAAGAAAGAGGCTGGAGAGGAAGTATTCAAGGATAGATGATAACTATAGTAGTCTAGATCAGGTTACAAGAAGTGTTGATACTGAGCGTGGACAGTTTAGCCTACAGGAAAAGAAAACCGTTGAAGCAATTGTGAAAGCCAGCTACATTGAACTTTACCTAACACCTTCACAGAAAGATGCACTTGCATTGTTTCCTATACGTTATAGAGATAAGCTAACTAAGTTTTAG 498 42.97 MAIRKNNFFLAAQESSWKLTIAKALVICEVMGGKSSKHGSSRRNSSSRSHSQQRSRYGYSESPYTQPRNTPQYQYAPPTPGYGGTQAPETRKRLERKYSRIDDNYSSLDQVTRSVDTERGQFSLQEKKTVEAIVKASYIELYLTPSQKDALALFPIRYRDKLTKF 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 728417 732621 - Hsped.09g00920.1 Hepe09g0092 578776

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0092 165 MobiDBLite consensus disorder prediction 37 76 - -
Hepe09g0092 165 MobiDBLite consensus disorder prediction 33 92 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0092 K16280 - - csv:101221610 118.627
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0092 Hepe-Chr9:728417 Hepe02g3064 Hepe-Chr2:79802214 3.39e-17 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g862 . . . . . . . . . . Cma10g00087 . Car10g00077 Car11g00057 . . Cpe04g01589 Bhi02g00592 . . . Hepe09g0092 . . Cla06g01707 Cam06g1895 Cec06g1944 Cco06g1948 Clacu06g1851 Cmu06g1792 Cre06g2607 . . Cone13ag0185 Cone19ag0178 . . . . . . . . . . . . . Cmo10g00088 . . . . . . . . . . . . . . . . . . . . . Lsi06g01600 Csa01g00097 Chy02g02625 Cme02g02023
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000334 5 8 3 4 5 2 4 4 4 4 2 2 4 4 4 7 3 7 6 4 5 4 3 3 3 3 4 11 11 3 136