Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g0102 | ATGGAGTGCAAAGAGCTCAATTGCAACAAGGTTTGTGCTGTTGAGGGAGGAAGTAACAGGAGTGGTGGAGGAGCTGGATTTATAGATAGGAGTAAGGTGAAAATTTTACTGTGTGACAATGATTCCAAGAGTTCACAAGAGGTTTTTACACTTCTTTTGCGATGCTCATATCAGGTCATTTCAGTCAGATCAGCTAGACAGGTGATCAATGCCTTGAATGCTGAGGGGCCAGATATAGATATCATTCTTACTGAAGTAGATTTACCTATGGCCAAAGGCATGAAAATGCTCAAATATGTCACACGGGACAAAGAGCTACGGCGTATTCCTGTGATCATGATGTCAGCGCAAGATGAGGTATCTGTTGTTGTCAAGTGCTTGAGGCTAGGTGCGACGGACTATCTCGTGAAGCCTCTACGAACAAACGAACTGCTAAACTTATGGACTCACATATGGAGACGACGGCGCATGCTCGGATTGGTGGAGAAGCAAATTTTAAATTTTGACTTTGATTTGGCGACCTCAGACCTTAGTGACCGCAATACCAATAGTACTACTTTTCTCTCGGATGACACTGATGATAATACTCATGGGAGTACCAATCCAGAATTGGATATGCCCCATCAGGAAGATGTGGCATTTTTTGGAGGCTTGGAGCTAAAATTTCTGTTATATTGTCTTATAAAAAAAATTGTCGAATGA | 702 | 42.17 | MECKELNCNKVCAVEGGSNRSGGGAGFIDRSKVKILLCDNDSKSSQEVFTLLLRCSYQVISVRSARQVINALNAEGPDIDIILTEVDLPMAKGMKMLKYVTRDKELRRIPVIMMSAQDEVSVVVKCLRLGATDYLVKPLRTNELLNLWTHIWRRRRMLGLVEKQILNFDFDLATSDLSDRNTNSTTFLSDDTDDNTHGSTNPELDMPHQEDVAFFGGLELKFLLYCLIKKIVE | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 826206 | 827801 | - | Hsped.09g01020.1 | Hepe09g0102 | 578786 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g0102 | 233 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
| Hepe09g0102 | 233 | ProSiteProfiles | Response regulatory domain profile. | 34 | 152 | IPR001789 | GO:0000160(InterPro) | |
| Hepe09g0102 | 233 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 32 | 181 | IPR045279 | GO:0009736(InterPro) | |
| Hepe09g0102 | 233 | MobiDBLite | consensus disorder prediction | 184 | 205 | - | - | |
| Hepe09g0102 | 233 | Gene3D | - | 33 | 204 | - | - | |
| Hepe09g0102 | 233 | SMART | REC_2 | 33 | 148 | IPR001789 | GO:0000160(InterPro) | |
| Hepe09g0102 | 233 | SUPERFAMILY | CheY-like | 31 | 164 | IPR011006 | - | |
| Hepe09g0102 | 233 | Pfam | Response regulator receiver domain | 35 | 146 | IPR001789 | GO:0000160(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g0907 | Hepe-Chr4:63332278 | Hepe09g0102 | Hepe-Chr9:826206 | 1.04e-23 | dispersed | |
| Hepe06g0835 | Hepe-Chr6:55125390 | Hepe09g0102 | Hepe-Chr9:826206 | 1.18e-29 | dispersed | |
| Hepe07g2493 | Hepe-Chr7:69298466 | Hepe09g0102 | Hepe-Chr9:826206 | 2.62e-41 | dispersed | |
| Hepe09g0102 | Hepe-Chr9:826206 | Hepe09g0595 | Hepe-Chr9:5591848 | 3.32e-21 | dispersed | |
| Hepe07g2494 | Hepe-Chr7:69301279 | Hepe09g0102 | Hepe-Chr9:826206 | 5.13e-56 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 56309 | PF00072 | Response_reg | 1.70E-17 | CL0304 | Hepe | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g0102 | K12127 | - | csv:101220107 | 322.398 |