Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0111 ATGGCGTTTCTTGGAGTTCTCTTGGTGGGTTTTCTTCTCTCTTTGGGATGTGTTCATGGCAACAACAATGGAGCTTGGATTAATGCCCACGCCACGTTCTACGGCGGTGGTGACGCCGCTGGTACAATGGGAGGGGCTTGTGGCTATGGGAATCTGTACAGCCAAGGCTACGGGACGAACACAGCAGCTCTAAGCACAGCTCTATTCAACAATGGACTGAGCTGTGGCGCTTGCTTTGAAATAAAGTGCGTAAACGACCCTAAGTGGTGTCTTTCAAACTCCATTGTCGTCACTGCCACAAACTTCTGCCCACCAAATAACGCACTCCCCAACAACGCCGGCGGCTGGTGCAATCCTCCCCAGCATCATTTCGACCTCTCCCAGCCCATTTTTCAAGAAATCGCCCAATTCAAAGCCGGCGTTGTCCCAGTGGCTTACAGAAGGGTGTCTTGTGAGAAGAAAGGAGGCATAAGATTCACAATAAACGGGCATTCGTACTTCAATTTGGTTCTTGTAACGAACGTGGGTGGATCTGGGGATGTTCATGGAGTGTGGATCAAAGGGTCGAAAACAGGGTGGGAAGCAATGTCGAGGAACTGGGGTCAGAACTGGCAGAGCAATTCAAATATGAATGGACAAAGCCTGTCGTTCAAGGTGGTCACCGGCGATGGCCGGACGGTGATATCCAATAACGCAGTACCAGCTGGGTGGAGCTTTGGTCAGACTTTTAGTGGGCTGCAGTTCCCATGA 750 50.93 MAFLGVLLVGFLLSLGCVHGNNNGAWINAHATFYGGGDAAGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDPKWCLSNSIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPIFQEIAQFKAGVVPVAYRRVSCEKKGGIRFTINGHSYFNLVLVTNVGGSGDVHGVWIKGSKTGWEAMSRNWGQNWQSNSNMNGQSLSFKVVTGDGRTVISNNAVPAGWSFGQTFSGLQFP 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 892173 893602 + Hsped.09g01110.1 Hepe09g0111 578795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0111 249 CDD DPBB_EXPA_N 26 151 - -
Hepe09g0111 249 Pfam Lytic transglycolase 61 146 IPR009009 -
Hepe09g0111 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 245 IPR007117 -
Hepe09g0111 249 PANTHER EXPANSIN-A15 11 247 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 Gene3D - 17 152 IPR036908 -
Hepe09g0111 249 PRINTS Expansin signature 155 167 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 114 131 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 95 105 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 83 94 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 202 223 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 231 247 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 56 70 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 131 144 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 PRINTS Expansin signature 167 188 IPR002963 GO:0009664(InterPro)
Hepe09g0111 249 FunFam Expansin 16 152 - -
Hepe09g0111 249 Pfam Expansin C-terminal domain 157 234 IPR007117 -
Hepe09g0111 249 SUPERFAMILY Barwin-like endoglucanases 25 174 IPR036908 -
Hepe09g0111 249 SUPERFAMILY PHL pollen allergen 153 244 IPR036749 -
Hepe09g0111 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 156 IPR007112 -
Hepe09g0111 249 Gene3D - 153 248 IPR036749 -
Hepe09g0111 249 SMART dpbb_1 61 146 IPR007112 -
Hepe09g0111 249 FunFam Expansin 156 248 - -
Hepe09g0111 249 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576(InterPro)
Hepe09g0111 249 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576(InterPro)
Hepe09g0111 249 PRINTS Expansin/Lol pI family signature 139 155 IPR007118 GO:0005576(InterPro)
Hepe09g0111 249 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576(InterPro)
Hepe09g0111 249 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576(InterPro)
Hepe09g0111 249 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3279 Hepe-Chr2:82407301 Hepe09g0111 Hepe-Chr9:892173 1.89e-133 dispersed
Hepe09g0111 Hepe-Chr9:892173 Hepe10g1240 Hepe-Chr10:47669621 6.29e-118 dispersed
Hepe06g1737 Hepe-Chr6:68468646 Hepe09g0111 Hepe-Chr9:892173 4.02e-13 transposed
Hepe07g1047 Hepe-Chr7:15740363 Hepe09g0111 Hepe-Chr9:892173 9.63e-87 transposed
Hepe10g1755 Hepe-Chr10:54338219 Hepe09g0111 Hepe-Chr9:892173 1.35e-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0111 - - - 0.0