Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0112 | ATGGCCACCGTCACTACGCAAGCTTCTGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGGTTCCTGTCTGGTTCTTCCGGTAAACTCCACCGTGTGCTGTCGGTTAAGCCGGTGGCTGCTTCGTCATCTTCGTCTTTCAAGGTGGAAGCGAAGAAGGGAGAGTGGTTGCCTGGTCTTCCTTCTCCGGGATACTTGACTGGCAGTCTTCCCGGCGACAACGGATTTGACCCCCTGGGTCTAGCGGAGGACCCAGAGAACTTGAGATGGTTCGTGCAAGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGAGTCGCCGGAATGCTCCTGCCGGAAGTGTTCACGAAGATCGGAATAATCAACGCCCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCGTCATCTTCAACCCTGTTCGTGATCGAGTTCATCCTGTTCCATTACGTGGAGATCAGAAGGTGGCAGGACATTAAGAACCCAGGCAGCGTTAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCAAAAATGAAGTGGGTTACCCCGGTGGCGTTTTCAACCCGCTGAATTTCGCACCCACGCTCGAGGCGAAAGAGAAGGAAATAGCCAATGGGAGACTTGCAATGTTGGCATTTTTGGGGTTCATTGTGCAACATAACGTGACGGGGAAGGGACCGTTCGACAACCTTTTGCAGCACATTTCAGACCCATGGCACAACACCATTGTCCAGACATTCGGTGGAAACTAA | 759 | 54.41 | MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVAASSSSSFKVEAKKGEWLPGLPSPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKNEVGYPGGVFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 895168 | 896476 | + | Hsped.09g01120.1 | Hepe09g0112 | 578796 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0112 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Hepe09g0112 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - | |
Hepe09g0112 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - | |
Hepe09g0112 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 19 | 245 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Hepe09g0112 | 252 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 63 | 242 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g1279 | Hepe-Chr8:13977069 | Hepe09g0112 | Hepe-Chr9:895168 | 2.16e-60 | dispersed | |
Hepe09g0112 | Hepe-Chr9:895168 | Hepe09g1201 | Hepe-Chr9:14807166 | 1.26e-49 | dispersed | |
Hepe01g1350 | Hepe-Chr1:78679114 | Hepe09g0112 | Hepe-Chr9:895168 | 8.55e-29 | transposed | |
Hepe02g1178 | Hepe-Chr2:14683397 | Hepe09g0112 | Hepe-Chr9:895168 | 4.47e-29 | transposed | |
Hepe02g2965 | Hepe-Chr2:78927245 | Hepe09g0112 | Hepe-Chr9:895168 | 3.84e-48 | transposed | |
Hepe07g1095 | Hepe-Chr7:18324693 | Hepe09g0112 | Hepe-Chr9:895168 | 1.67e-27 | transposed | |
Hepe09g0945 | Hepe-Chr9:9504103 | Hepe09g0112 | Hepe-Chr9:895168 | 4.07e-65 | transposed | |
Hepe10g1514 | Hepe-Chr10:51884660 | Hepe09g0112 | Hepe-Chr9:895168 | 9.21e-77 | transposed | |
Hepe01g2379 | Hepe-Chr1:88170816 | Hepe09g0112 | Hepe-Chr9:895168 | 4.58e-26 | transposed | |
Hepe07g2501 | Hepe-Chr7:69346219 | Hepe09g0112 | Hepe-Chr9:895168 | 3.57e-164 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0112 | K08910 | - | csv:101222701 | 485.337 |