Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0135 ATGGAGGCTAAACAAGATGATAGAGTTGAATCAAGTGGAGGAGATGAAGAATTAGCTGCTGCAAAACAAGATGATCTTCTTCACAAGGTCACTTTTATGGCTGACTTGGAAAAGCCCTCCATGGAATCCCTCTCACTCCCATCAGCTTCTTCAAGTTGGAAGGAAGAAGAGGATCATCACCATGAACAAAGAATCAAGATGGCGAAAGTTGAAATGGGGCAAGTGAGAGAAGAAAACCAGAGGCTAAAAAATTGTTTGGATAAAATGATGAAGGATTACGAGAGCTTGAAAAGGCAGTTCCATGAGATAAGTCAAAGTCAAAGAGAAGGAAAAAAATCGACACAAACAAGTGGAAGTACCATAAATAATGATGAGGTAGTTGAAGAAGTGGACGACATGGTTTCACTCACATTAGGAAGATTCTCAAGCGATATTCAAAACAAGAACATCAAGAACAACACATCTTCTCAAAGAACATTAGAACATCAAATGTTGTTAGACCTCAAACAAGATCATAGTTGGGGATCTCAGCTTGTTGGAGGAGTTGCTCAAACAACAAATATTCTTAATGCCCCATCAATTGATCACATTATTCAAACTCCAACAACAACGGATAGTGAAGTAGCTAAAGACGAAGAAGCCGGAGAGACGACTTGGCCGCCGAGTAAAGTGTTGAAAACTTTGCCCGCGCCGGCCACCGGAGAAGATGAAGTTTCTCAACAGAATCCTCCCAAGAAAGCTAGGGTTTGTGTGAGAGCTCGATGTGATACGCCAACGATGAACGATGGATGTCAATGGAGGAAATACGGACAGAAGATTGCAAAAGGAAATCCTTGCCCTAGAGCTTACTATCGTTGCACTGGTGCACCCTCATGTCCAGTTAGGAAACAGGTGCAAAGGAGTGTTGATGATATGTCCATACTAATCACCACCTATGAAGGAACTCACAACCACCCTCTACCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCGGCGGCCGCCTCCATGCTCCTCTCGGGCCCTTCCTCCTCCACCTCTCGGCCCGGCCTTAACCCATCATCGTCGGTCGGTGCGACGACGAATCTCCATGGAATGAACTTGTACCTCTCAAACAACATGACCAATAATTCAAAGCAATTCTACTTGCCAAACTCTTCAATGCTATCTTCTTCACTCAACCACCCAACAATCACTTTAGACCTCACTTCAAACCCTCCATCAACTTCCTCCTCCTCCTCTCCTTTCCATAAAATAATCCCTTCAACTAATAATTATCCCCCAAAATATCCCTTCACCAACCTTGATTTTGGCTCTTCTCAACCCAACTTCATGTCTTGGAATAACAATAATAATAGCCAATTGCCTCCTTATCATTTAACCAAAAATAATAATGCAATAGGAATGGCATCAACTAACATCTATCAAGCCTGCCTTCAACAATTTACCAAGCCTTCAACTTTGCCACTCTCGTCGTCGTCGCCGCCTCTACCAGACACGATAGCGGCAGCAACCAAGGCAATTACCTCGGACCCGAGTTTCCAATCGGCATTGGTGGCTGCACTCAGCTCGATCATCGGCGGGGGGGAGGCGGTTGCTCCTATGTCTAGCTATGTTCAAGTACCACAGCTGGGGAATGTGGGGTTTCAGCCACCTCCATCATTGACATGCTCCACCTCCAAGAGTAGTCCTTCTTCTTCTCCTGGTGGTAGTAGGGACAATGCCAAGTGA 1731 45.06 MEAKQDDRVESSGGDEELAAAKQDDLLHKVTFMADLEKPSMESLSLPSASSSWKEEEDHHHEQRIKMAKVEMGQVREENQRLKNCLDKMMKDYESLKRQFHEISQSQREGKKSTQTSGSTINNDEVVEEVDDMVSLTLGRFSSDIQNKNIKNNTSSQRTLEHQMLLDLKQDHSWGSQLVGGVAQTTNILNAPSIDHIIQTPTTTDSEVAKDEEAGETTWPPSKVLKTLPAPATGEDEVSQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQVQRSVDDMSILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSRPGLNPSSSVGATTNLHGMNLYLSNNMTNNSKQFYLPNSSMLSSSLNHPTITLDLTSNPPSTSSSSSPFHKIIPSTNNYPPKYPFTNLDFGSSQPNFMSWNNNNNSQLPPYHLTKNNNAIGMASTNIYQACLQQFTKPSTLPLSSSSPPLPDTIAAATKAITSDPSFQSALVAALSSIIGGGEAVAPMSSYVQVPQLGNVGFQPPPSLTCSTSKSSPSSSPGGSRDNAK 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1069494 1075544 - Hsped.09g01350.1 Hepe09g0135 578819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0135 576 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe09g0135 576 Gene3D WRKY domain 245 322 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe09g0135 576 SMART WRKY_cls 260 320 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe09g0135 576 Coils Coil 72 106 - -
Hepe09g0135 576 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 528 IPR044810 GO:0003700(InterPro)
Hepe09g0135 576 MobiDBLite consensus disorder prediction 1 61 - -
Hepe09g0135 576 SUPERFAMILY WRKY DNA-binding domain 253 321 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe09g0135 576 MobiDBLite consensus disorder prediction 338 358 - -
Hepe09g0135 576 MobiDBLite consensus disorder prediction 102 126 - -
Hepe09g0135 576 MobiDBLite consensus disorder prediction 549 576 - -
Hepe09g0135 576 MobiDBLite consensus disorder prediction 204 224 - -
Hepe09g0135 576 MobiDBLite consensus disorder prediction 1 32 - -
Hepe09g0135 576 Pfam WRKY DNA -binding domain 261 319 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe09g0135 576 MobiDBLite consensus disorder prediction 109 124 - -
Hepe09g0135 576 FunFam probable WRKY transcription factor 31 245 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1969 Hepe-Chr1:84469385 Hepe09g0135 Hepe-Chr9:1069494 1.26e-21 dispersed
Hepe02g0232 Hepe-Chr2:2368024 Hepe09g0135 Hepe-Chr9:1069494 6.28e-53 dispersed
Hepe04g1747 Hepe-Chr4:72500171 Hepe09g0135 Hepe-Chr9:1069494 1.21e-51 dispersed
Hepe09g0135 Hepe-Chr9:1069494 Hepe10g0218 Hepe-Chr10:2209337 7.87e-21 dispersed
Hepe07g0482 Hepe-Chr7:4957862 Hepe09g0135 Hepe-Chr9:1069494 2.72e-47 transposed
Hepe07g2287 Hepe-Chr7:67198609 Hepe09g0135 Hepe-Chr9:1069494 2.54e-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56316 PF03106 WRKY 5.70E-24 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0135 - - - 0.0