Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0145 ATGGACGCCGCCGCTGCCGATTCTCTTGATTCCTCCTCGGACGGAAAACAAGATCATGAATCGCCGACGACCACGCCGGAAGCGGCCGAGGATTACTACTCCGCCGATTCGGGACTCTCCGCTGTTTCGCTGGCGGAGGCTCCAATTCTCCTGCTTGTTAAATTCCACAGAGCGCTGCGATCGGAGCTGGCGGATTTACGGCGCGTGACGTTGGCGGCGGCGGAGACTGCCTGTTACGGCCGCGAGTTCGTGTCGGGATTGATTCGGAGATTGGAGTTTCTGAAACTTGCTTATAAGTATCATTGCGCCGCCGAAGATGAGGTTGTATTCCCAGCTCTTGATTTACACACAAAAAATGTAGTTTCCACATATTCTCTTGAGCATGAAAGCATAGATGGCCTCTTCACTTCCATTTTTGAACACTGTGAAGAAATCAATGAAGAAAACAAAGATATCTCCAAGCCATTTCAGGAACTTGTTTTCTGTTTGGGCACCATTCAAACCACCATTTGCCAACATATGATCAAAGAAGAACAACAGGTGTTTCCATTGCTGATGAAGCAATTCTCCGCGGGAGAACAGGCGTCACTTGTGTGGCAATTCATTTGCAGTGTACCAATGATACTATTGGAGGAGTTTCTGCCATGGATGATGTCTTTTCTTCCATCAGAGGAACAAGCAGAAGTTGTAAACTGCCTAAGAGATGTAGTGCCGAACGAGAAACTACTGCAAGAGGTGATAATGTCTTGGCTTGGAAGCAATGGAGAACCTTGTAGAGATGTAGAAGCAGAAGATATAAAGTGTGTTATTTCCAACTTGAATTCATCTCATGACAGTGGACAGAGCCCTGTTGATAGCCTCCACCTTTGGCATTGTGCCATTATGAAGGATCTGAAGGAAGTTCTAAAATGCCTATTTCAAGTGAAGAGCTGCACTACAACACCTCTTTCTAACCTTGATTCCTTACTTGTCCAAATCAAGTTCCTAGCTGATGTTATTCTTTTCTACAGAAAGGCATCGGAGAAGTTCTTTCGTCCCGTGTTCAATCAACATTCCGACGTCTGCCTAATCTCCTCCGACCAATCGTTTCTTGACGACAGTCATATTGAAGGCTTACAACGGTTGCTGCAGCATGGTGCGCAAGATACTATACCTTTGAGCAATTTTTTGGAAAAACTGTGCTGGGACATGGAGTCGTTTGTCGTACGAGTCAGGAAACAGTTCACTTTTCAAGAAACAAAGGTGCTTCCAATGATTAGAAAGACCTGCAGCCATAAAACACAGCAACAGCTCCTGTATATGAGCCTCCGTACCTTGCCACTTGGGCTCTTGAAGTGTATTATTACATGGTTTTCAGCTCACTTATCTGAGGAAGAATTGAGATCTCTACTTCACACAAAATCGAAGGGAGATTTTCAGGTCAATGATGCACTTGTCTCCCTCTTACAAGAGTGGTTTCGAATTGGCTACTCGGGAAAAACTTCGGTCGAACAATTTGGACAAGATTTGCAGAAAATTTTCCAGACCAGAAGCTCTTTTGTGCATGAACAGCAGGTGGAACAAATGAAGGAAGTTGCTGGAACTTCATCCTTGAACTCAAATGTTGAATCTTATAAAGGGTCAAACTCTGAGGAAATGGGATTAGTTTCTACCAACAAGAACAAGAGCCTCATGTCACATTCTTCACCTGGTGTTTCTTGCACTGATTCAGTGTATGAAACATCTTATTCTAGTGGAATCAATCTGCAGATACATTTTCCAGGAACAGTAAAGGTACCATGTCCCTATACTAAACATCTTTACGAAGAACGACCGCATTCGGCTTTTAATCAGCCAAAGCCAATAGACCTCATTTTCTTTTTCCACAAAGCTCTCAAGAAAGAATTGGACTACTTTGTTCTTGGTTCAGCTAAGCTGGTTGAAAATGTTGGGATCTTAGCAGAGTTTATAAGGCGGTTCCAATTGGTAAGATATTTATATCAAATCCATACGGATGCCGAGGACCAGATTGCTTTTCCAGCTTTGGAGAAGAAGGGAAAGTTACAAAATATTAGCTACTCATACACCATTGATCATAAACTGGAAGTACACCAATTCAGTAAAATATCCTTCATTCTTAATGAAATGTCTGAATTGCACGGTTCAGTTTTTTATGTCAAGGCTGATAGGAAAATGTTTAGTCACAGGCAACTCTGTCTGGAACTCCATGATGTGTGCAAATCTCTGCATAAGTCGCTCTCTGACCACGTCGACCGTGAAGAAATTGAGCTTTGGCCCTTGTTTAGAGAATTCTTCTCGATCGAAGAGCAAGAAAATCTAATCGGAGCAATATTTGGCAGAACAAAAGCCGAAATATTGCAAGATATGATACCTTGGCAAATGTCATATTTAACACCTGCTGATCAACATGACATGATGTCCATGTTCCACAAGGTAACAAGAAATACTATGTTCAATGAATGGTTAAGAGAATGGTGGGAAGGTTATGCACACGACACAGTGGCGACTGAGGCGACAACTATTTCTTCCTCATTGACTTCAGATCCCTTGGAAATCATCTCAAAATATCTATCCAAGGAAGCAACTGATGTACGTGAAGGAAATATTTTTGGAGAAACCATCAGCTCAGCACAGAAGGAACGTCAATGTCATGCTACCGATGTCAAAAAGACAGAAATGTTCAACTTGAATGATGAAACAAAAGATTTTGATGCCAGCCAACATAATGAGACATTTGGAGAATGCACAAAGCTCGTTTCTCATGGGATTGGCGATATTATTACAGAACACGGGACCGAAACGGAACGACAAGAAGACGGTAAGAAATCGAGCCAACACGACCACCTTCTTACAATTAGTCAAGAAGATCTGGAGGCAGTAATAAGAAGGGTATCGAGAGACTCGTCCTTAGACTCCAAAAGTAAATCCTATTTGATACAGAATTTGCTAATGAGCCGTTGGAATGCAAAGCACCAAGGTTCCCAATTAGACACAAACGTCACTACAGATAGCCAAGGATTTGCAGGTCAGTTTCCATCTTATAGGGATTCCTTGAAAAAGGCATTTGGTTGCAAACATTACAAAAGAAACTGCAAGCTTCTCGCTCCATGTTGCGACCAACTATATGCATGCATACATTGTCACGACGAGGCTACCGATCACTCATTGGATAGAAAATCCATCACAAAGATGATGTGCATGAACTGCTTGGTAGTTCAGCCCATTGGCAAGACATGTTCAACTGTCTCTTGTGGTAATTTGTCAATGGGAAAATACTTCTGCAAGATCTGCAAACTATTCGACGATTCGAGAGATATCTACCACTGTCCATACTGCAACCTATGCAGAGTGGGGAAGGGATTGGGCATTGACTACTTCCATTGCATGAACTGCAATGCTTGTATGTCTCGGGCGCTCTCGGTTCATGTATGCAGAGAGAAGTGCCTTGAAGACAACTGCCCAATTTGCCATGAATACATCTTCACATCCACACTTCCAGTCAAGTCCCTTCCATGTGGTCATTTGATGCACTCAACATGCTTTCAGGAATACACCTACACTCATTATACCTGCCCTATCTGTAGCAAGTCGCTGGGAGATATGCAGGTGTACTTTGAGATGCTGGATGCATTGTTGGCTGAAGAGAAAATTCCAGATGAGTATTCTGGGAAAACTCAGGTGATACTGTGTAATGACTGTGAGAAGCGTGGAACAGCACAATTCCACTGGTTGTACCATAAATGTCCCTGTTGCGGTTCATATAATACTAGGGTTTTGTAA 3780 42.78 MDAAAADSLDSSSDGKQDHESPTTTPEAAEDYYSADSGLSAVSLAEAPILLLVKFHRALRSELADLRRVTLAAAETACYGREFVSGLIRRLEFLKLAYKYHCAAEDEVVFPALDLHTKNVVSTYSLEHESIDGLFTSIFEHCEEINEENKDISKPFQELVFCLGTIQTTICQHMIKEEQQVFPLLMKQFSAGEQASLVWQFICSVPMILLEEFLPWMMSFLPSEEQAEVVNCLRDVVPNEKLLQEVIMSWLGSNGEPCRDVEAEDIKCVISNLNSSHDSGQSPVDSLHLWHCAIMKDLKEVLKCLFQVKSCTTTPLSNLDSLLVQIKFLADVILFYRKASEKFFRPVFNQHSDVCLISSDQSFLDDSHIEGLQRLLQHGAQDTIPLSNFLEKLCWDMESFVVRVRKQFTFQETKVLPMIRKTCSHKTQQQLLYMSLRTLPLGLLKCIITWFSAHLSEEELRSLLHTKSKGDFQVNDALVSLLQEWFRIGYSGKTSVEQFGQDLQKIFQTRSSFVHEQQVEQMKEVAGTSSLNSNVESYKGSNSEEMGLVSTNKNKSLMSHSSPGVSCTDSVYETSYSSGINLQIHFPGTVKVPCPYTKHLYEERPHSAFNQPKPIDLIFFFHKALKKELDYFVLGSAKLVENVGILAEFIRRFQLVRYLYQIHTDAEDQIAFPALEKKGKLQNISYSYTIDHKLEVHQFSKISFILNEMSELHGSVFYVKADRKMFSHRQLCLELHDVCKSLHKSLSDHVDREEIELWPLFREFFSIEEQENLIGAIFGRTKAEILQDMIPWQMSYLTPADQHDMMSMFHKVTRNTMFNEWLREWWEGYAHDTVATEATTISSSLTSDPLEIISKYLSKEATDVREGNIFGETISSAQKERQCHATDVKKTEMFNLNDETKDFDASQHNETFGECTKLVSHGIGDIITEHGTETERQEDGKKSSQHDHLLTISQEDLEAVIRRVSRDSSLDSKSKSYLIQNLLMSRWNAKHQGSQLDTNVTTDSQGFAGQFPSYRDSLKKAFGCKHYKRNCKLLAPCCDQLYACIHCHDEATDHSLDRKSITKMMCMNCLVVQPIGKTCSTVSCGNLSMGKYFCKICKLFDDSRDIYHCPYCNLCRVGKGLGIDYFHCMNCNACMSRALSVHVCREKCLEDNCPICHEYIFTSTLPVKSLPCGHLMHSTCFQEYTYTHYTCPICSKSLGDMQVYFEMLDALLAEEKIPDEYSGKTQVILCNDCEKRGTAQFHWLYHKCPCCGSYNTRVL 1259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1163876 1173123 - Hsped.09g01450.1 Hepe09g0145 578829

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0145 1259 CDD RING-H2_Pirh2-like 1152 1195 - -
Hepe09g0145 1259 SUPERFAMILY Zinc hairpin stack 1090 1144 IPR037275 -
Hepe09g0145 1259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1146 1197 IPR013083 -
Hepe09g0145 1259 ProSiteProfiles Zinc finger CHY-type profile. 1017 1086 IPR008913 GO:0008270(InterPro)
Hepe09g0145 1259 SUPERFAMILY RING/U-box 1141 1199 - -
Hepe09g0145 1259 Pfam CHY zinc finger 1024 1092 IPR008913 GO:0008270(InterPro)
Hepe09g0145 1259 MobiDBLite consensus disorder prediction 1 29 - -
Hepe09g0145 1259 SUPERFAMILY CHY zinc finger-like 1016 1080 IPR037274 GO:0008270(InterPro)
Hepe09g0145 1259 CDD Hr-like 616 759 - -
Hepe09g0145 1259 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 648 1258 - -
Hepe09g0145 1259 Pfam Ring finger domain 1151 1194 IPR001841 -
Hepe09g0145 1259 Pfam Zinc-ribbon 1200 1257 IPR039512 -
Hepe09g0145 1259 Gene3D - 1224 1259 - -
Hepe09g0145 1259 Gene3D nmb1532 protein domain like 609 780 - -
Hepe09g0145 1259 Gene3D nmb1532 protein domain like 51 203 - -
Hepe09g0145 1259 Pfam Hemerythrin HHE cation binding domain 51 185 IPR012312 -
Hepe09g0145 1259 CDD Hr-like 51 183 - -
Hepe09g0145 1259 ProSiteProfiles Zinc finger CTCHY-type profile. 1089 1152 IPR017921 -
Hepe09g0145 1259 FunFam Zinc finger protein-related isoform 1 1148 1197 - -
Hepe09g0145 1259 ProSiteProfiles Zinc finger RING-type profile. 1153 1195 IPR001841 -
Hepe09g0145 1259 SMART ring_2 1153 1194 IPR001841 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0145 K16276 - - csv:101212459 2157.49
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1172 Hepe-Chr1:76874994 Hepe09g0145 Hepe-Chr9:1163876 1.10e-253 dispersed
Hepe08g0929 Hepe-Chr8:8552807 Hepe09g0145 Hepe-Chr9:1163876 9.73e-20 dispersed
Hepe09g0145 Hepe-Chr9:1163876 Hepe09g0355 Hepe-Chr9:3107414 7.69e-264 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g483 . . . . . . . . . . Cma10g00305 . Car10g00290 . Sed08g0191 . . Bhi02g00363 Tan09g2172 Cmetu02g1853 . Hepe09g0145 . . . . . . . . . . . Cone13ag0096 Cone19ag0099 . . . . . Blo15g00295 . . Bpe07g00800 . . . . Cmo10g00326 . . . . . . Cpe18g00810 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009308 0 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 3 34