Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0164 ATGGCGACGGTTCGGGAGCTCTTCCGGCGGAGCCCCACCGAAGAACTTGGTGGGGTTTCTGATGATTTGAATCAGGGTAGTTCGGTGGAGCTTCATGTTCTTGCTGTTGATGATAGCCTTGTCGATCGGAAGGTTATTGAGCGGTTGCTGAAGATCTCTTCATGTAAAGTGACTGCTGTTGAGAGTGGGAGAAGTGCTCTGCAATATCTGGGATTAGATGGTGAAGCTAGCTCTGTTCAGTTTAATGGTTTGAAGGTGAATCTCATCATCACAGATTACTCCATGCCTGAAATGACAGGATATGAACTGCTCAAGAAGATCAAGGAATCGTCGGCTTTCAGGGAGGTTCCTGTTGTGATAATGTCATCGGAGAATATTTTGGCTCGAATAGACAATTGCTTGAAGGAAGGGGCTGAAGAATTCATAGTGAAGCCTGTGAAACTGTCTGATGTGAAACGATTGAAAGATTTCATTATGAAAGGAGAAGATGGAGGGAAGAAGAAAATTGGTGTTAAGAGGAAGCTCCACCTTGATCTTGATCTTGATCTCGATCACCACCCCTTGTCTCCGGGGTCTAAGACGTTGTCGGTGGCAACTTTCGATCATTGCCAAGGATTTCTGCAACGATCACCGCGGATCACATGTTCATCAAAGAAACCTAGGTTCGTCAATGGCGACTAA 681 45.67 MATVRELFRRSPTEELGGVSDDLNQGSSVELHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGEASSVQFNGLKVNLIITDYSMPEMTGYELLKKIKESSAFREVPVVIMSSENILARIDNCLKEGAEEFIVKPVKLSDVKRLKDFIMKGEDGGKKKIGVKRKLHLDLDLDLDHHPLSPGSKTLSVATFDHCQGFLQRSPRITCSSKKPRFVNGD 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1312143 1314509 - Hsped.09g01640.1 Hepe09g0164 578848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0164 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 165 IPR045279 GO:0009736(InterPro)
Hepe09g0164 226 ProSiteProfiles Response regulatory domain profile. 32 159 IPR001789 GO:0000160(InterPro)
Hepe09g0164 226 CDD REC_typeA_ARR 33 154 - -
Hepe09g0164 226 Pfam Response regulator receiver domain 33 151 IPR001789 GO:0000160(InterPro)
Hepe09g0164 226 Gene3D - 31 184 - -
Hepe09g0164 226 SUPERFAMILY CheY-like 31 154 IPR011006 -
Hepe09g0164 226 SMART REC_2 31 155 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0485 Hepe-Chr4:56344491 Hepe09g0164 Hepe-Chr9:1312143 1.30e-46 dispersed
Hepe05g0710 Hepe-Chr5:12677465 Hepe09g0164 Hepe-Chr9:1312143 1.05e-49 dispersed
Hepe09g0164 Hepe-Chr9:1312143 Hepe09g0490 Hepe-Chr9:4561601 2.02e-09 dispersed
Hepe10g1680 Hepe-Chr10:53515929 Hepe09g0164 Hepe-Chr9:1312143 1.18e-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56321 PF00072 Response_reg 4.40E-21 CL0304 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0164 K14492 - csv:101214143 303.523