Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0167 ATGTTTGTTAATATTGTACAGGACGATGTTGCTGGGTGCTTTGATTACTATGCAGGTCTTGCCGAAGGGTTGGATGCAAAGCAAAAAACTCCTATTTCCGTTCCCATGGATACATTCAAGAGCTATATTCTTAGAGAACCCATTGGAGTTGTTGGGTTGATTACTCCTTGGAACTATCCTCTATTGATGGCTGTATGGAAAGTTGCACCTGCCTTGGCTGCTGGGTGTGCTGCAATATTGAAGCCATCAGAATTGGCATCTGTGACCTGTTTGGAACTGGCTGCAATCTGTAAAGATGTTGGTCTTCCACCTGGTGTTTTGAATATTCTGACTGGATTGGGCCCTGAAGCTGGTGCTCCTCTAGCATCTCATCCTCATGTTGACAAGATTGCATTTACTGGGAGTGGTGCTACTGGAAGCAAGATTATGACAGCAGCTGCCCAACTTGTCAAGCCTGTTACCATGGAACTTGGTGGAAAAAGTCCGATTGTTATTTTTGAGGATGTCGACCTTGATAAGGCTGCCGAATGGACAGTCTTTGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCTACATCCCGTCTACTTGTTCACGAAAACATTGCTGATGAATTCTTGGATAAGCTCGTGCAATGGTGCAAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGGCTTGGCCCTGTTGTTAGTGCAGGACAGCATGAGAAAGTATTGAAGTTTGTCTCAAATGCTGAGAGTGAAGGTGCAAAGGTTCTATTTGGTGGAGTTCGCCCTAAGCACCTAGAGAAGGGATACTTCGTTGAACCAGCCATTATTACTAATGTTACGAGGTCCATGCAAATATGGAAAGAAGAAGTCTTTGGACCTGTTCTATGTGTGAAGACTTTTAGTTCTGAAGATGAAGCTATTGAATTAGCAAATGATACAATATATGGACTAGGTGCTGCTGTGATATCAAATGATTTAGAAAGGTGTGAGCGTGTAACCAAGGCTTTACAGGCCGGAATTGTGTGGGTTAATTGCTCACAACCATGCTTCACTCAAGCCCCATGGGGAGGCAACAAACGCAGTGGCTTTGGTCGAGAGCTAGGGGAATGGGGACTTGAAAATTATCTGACTGTAAAGCAGGTAACTCAATATGTATCAGATGAACCATGGGGATGGTACCAATCTCCTTCTAAACTGTAA 1200 43.58 MFVNIVQDDVAGCFDYYAGLAEGLDAKQKTPISVPMDTFKSYILREPIGVVGLITPWNYPLLMAVWKVAPALAAGCAAILKPSELASVTCLELAAICKDVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSGATGSKIMTAAAQLVKPVTMELGGKSPIVIFEDVDLDKAAEWTVFGCFWTNGQICSATSRLLVHENIADEFLDKLVQWCKNIKISDPLEEGCRLGPVVSAGQHEKVLKFVSNAESEGAKVLFGGVRPKHLEKGYFVEPAIITNVTRSMQIWKEEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCERVTKALQAGIVWVNCSQPCFTQAPWGGNKRSGFGRELGEWGLENYLTVKQVTQYVSDEPWGWYQSPSKL 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1327546 1333765 - Hsped.09g01670.1 Hepe09g0167 578851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0167 399 Pfam Aldehyde dehydrogenase family 9 381 IPR015590 GO:0016491(InterPro)
Hepe09g0167 399 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 3 173 - -
Hepe09g0167 399 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 183 194 IPR016160 GO:0016491(InterPro)
Hepe09g0167 399 SUPERFAMILY ALDH-like 10 384 IPR016161 GO:0016491(InterPro)
Hepe09g0167 399 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 8 398 - -
Hepe09g0167 399 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 8 379 IPR016162 GO:0016491(InterPro)
Hepe09g0167 399 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 155 162 IPR029510 GO:0016491(InterPro)
Hepe09g0167 399 CDD ALDH_F10_BADH 8 383 - -
Hepe09g0167 399 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 163 354 IPR016163 GO:0016620(InterPro)
Hepe09g0167 399 FunFam Betaine aldehyde dehydrogenase 159 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2460 Hepe-Chr8:65631740 Hepe09g0167 Hepe-Chr9:1327546 1.84e-48 dispersed
Hepe09g0167 Hepe-Chr9:1327546 Hepe09g0747 Hepe-Chr9:7167395 5.92e-103 dispersed
Hepe09g0167 Hepe-Chr9:1327546 Hepe09g0192 Hepe-Chr9:1523972 1.87e-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0167 K00130 - csv:101213657 739.954