Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0191 ATGCATAACATCGCGTATTCACGATTGAGCGACTTTCATAAATCTCTGTCTCTGTACCGAAAAGTTCCATGGTGGGATCACATCCTCGAACCAGATTCCGAATTCGTCGTCCGATGGAATCGCATCTTCCTCGTCACTTGCTTGATCGCTCTCTTCGTCGATCCTCTCTACTTCTATCTCCCCGTCATCGGCGGCCCTGCTTGTATGCGATTCCACATGAAACTTGGCATCATCGTCACTTTCTTCCGCACTGTCGTCGATTTGTTCTCCCTCTTTCATATGTGTATGAAGTTTCGCACCGCCTTCGTTGCTCCTAATTCTAGGGTTTTTGGCCGCGGAGAGCTCGTTATGGAACCTAGGGCTATTGCTATGCGCTATCTCAAGAAGGATTTTCTCATCGATCTTGCCGCTACGCTTCCCCTGCCTCAGATTATGATTTGGTTCGTGATTCCAGCATTAAAAAGCTCGATAGCGGCTCATGCGAACCACACTCTTGCTTTGATTGTGCTGATTCAATATGCCCCACGACTGTTTGTTATATTTCCTCTGAACAGACGGATCAATAAGACCACTGGATCAATAGCCAAAACTGCCTGGGCTGGTGCAGCTTATAATCTCCTTCTCTATATTCTCGCTAGCCATGTTATAGGAGCTGCCTGGTATGTGGCATCCATTCAGCGTCAGGATGAATGTTGGAAGACAGAATGCAGGAAGGAGAAGAATACCACGCATTCTCCCTCGTGCCGCCCTATTTTTCTCGACTGTGAAACTTTGAACAACTCAGAACGACGCGCTTGGCTAAAAGTTACTCATGTCCTTGAAAACTGTGATGCGTTAAAAGATGACAACGATTTTGAGTTTGGGTTGTTTGCTGATGCGGTTACTGATGAAGTTGCTTCAGCATACTTTTTGGAGAAGTACTTCTACTGCCTTTGGTGGGGTTTGAAGAGTTTGAGTGCATATGGACAAAATTTAACGACGAGCACTTATGTTGGTGAAATTTTATTTAGCATTATGATTTGCTCATTGGGGTTGGTTCTCTTCTCACACCTCATAGGTCAAGTGCAAGGCTATCTGCAATCCACGAGTGCTAGACTTGAACAGTGGAGAGTAAGACGAAGAGACACAGAGGAATGGATGAGGCATCGACAATTGCCCATTCATTTGCAAGAACGTGTTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGTGTAGACGAAGAGTCAATCTTGCGTGCTTTACCTTTGGATCTCCGACGTCAAATTCAGAGACATCTTTCTCTTGCGCTTATTCGTCGTGTTCCATTTTTTGCACAAATGGATGGTCAGTTATTGGATGCGATATGCGAGCGCTTGGTCTCGTCGTTGAATACTAAAGACACATTCATAACGAGGGAGGGAGATCCAGTAAACGAGATGCTCTTCATTATCAGAGGCCAACTAGAGAGCTCCACAACCAATGGAGGTAGGTCAGGATTCTTCAACTCCATCACCCTCAGACCCGGCGACTTCTGCGGCGAAGAGCTTCTAACATGGGCCTTAGTCCCAACCCCAAGCCTAAGCTTTCCCTCCTCAACTCGAACCGTGAAGTCACTGACCGAGGTCGAGGCATTCGCTCTCCGAGCCGAGGATCTGAAGTTTGTTGCCAGCCAGTTTAAGCGGCTCCACAGCAAGAAACTGCAGCATGCATTCAGATACTATTCCCACCAATGGAGGACATGGGGATCTTGCTTCATACAAGCTGCTTGGAGAAGATATGTGAAAAGAAGGCTAGCAATGGAGTTAGCAAGACAAGAGGAGTTGTATTACACAACCATAATAGACCAAGATTACAGCCATGACAGTGAAATTGAAGGTCAAGAAGTTGGTAAAACGAGTAGTGGCGGCTCGAAAAAGGTCGGTGCAACCAAAGCTCCAGGTATTGGAATAACAATGTTGGCTTCAAAGTTTGCAGCAAATACAAGAAGAGGAGCTATCCGGAAGTTGACTGCGCTCGACCCTGATTCCTCCAGCTTGAAAATGCCCAATCTCTTTAAGCCTGATGAACCAGATTTCTCTTCTTTCCAAGGATGA 2079 46.08 MHNIAYSRLSDFHKSLSLYRKVPWWDHILEPDSEFVVRWNRIFLVTCLIALFVDPLYFYLPVIGGPACMRFHMKLGIIVTFFRTVVDLFSLFHMCMKFRTAFVAPNSRVFGRGELVMEPRAIAMRYLKKDFLIDLAATLPLPQIMIWFVIPALKSSIAAHANHTLALIVLIQYAPRLFVIFPLNRRINKTTGSIAKTAWAGAAYNLLLYILASHVIGAAWYVASIQRQDECWKTECRKEKNTTHSPSCRPIFLDCETLNNSERRAWLKVTHVLENCDALKDDNDFEFGLFADAVTDEVASAYFLEKYFYCLWWGLKSLSAYGQNLTTSTYVGEILFSIMICSLGLVLFSHLIGQVQGYLQSTSARLEQWRVRRRDTEEWMRHRQLPIHLQERVRRFVQYKWIATRGVDEESILRALPLDLRRQIQRHLSLALIRRVPFFAQMDGQLLDAICERLVSSLNTKDTFITREGDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPTPSLSFPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYVKRRLAMELARQEELYYTTIIDQDYSHDSEIEGQEVGKTSSGGSKKVGATKAPGIGITMLASKFAANTRRGAIRKLTALDPDSSSLKMPNLFKPDEPDFSSFQG 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1516181 1521032 + Hsped.09g01910.1 Hepe09g0191 578875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0191 692 Pfam Cyclic nucleotide-binding domain 461 550 IPR000595 -
Hepe09g0191 692 FunFam Cyclic nucleotide-gated ion channel 1 436 554 - -
Hepe09g0191 692 Pfam Ion transport protein 39 365 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe09g0191 692 SMART cnmp_10 438 569 IPR000595 -
Hepe09g0191 692 MobiDBLite consensus disorder prediction 669 692 - -
Hepe09g0191 692 SUPERFAMILY cAMP-binding domain-like 367 563 IPR018490 -
Hepe09g0191 692 Gene3D - 41 359 - -
Hepe09g0191 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 24 663 - -
Hepe09g0191 692 Gene3D Jelly Rolls 436 556 IPR014710 -
Hepe09g0191 692 CDD CAP_ED 438 569 IPR000595 -
Hepe09g0191 692 SUPERFAMILY Voltage-gated potassium channels 31 360 - -
Hepe09g0191 692 ProSiteProfiles cAMP/cGMP binding motif profile. 438 568 IPR000595 -
Hepe09g0191 692 Gene3D Helix hairpin bin 360 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0191 Hepe-Chr9:1516181 Hepe09g0522 Hepe-Chr9:4885919 9.13e-282 dispersed
Hepe02g1860 Hepe-Chr2:28925007 Hepe09g0191 Hepe-Chr9:1516181 6.20e-317 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0191 K05391 - csv:101209760 1202.58