Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0192 ATGGCTGCTCGTAGAGGAATCACTTCTTTACTCTCTCGTTCTCTCTTTTCTTCTTCTTCTTCTTCTGGTTATGGGTTTTGTTCTCTTCTTCAATCTCATGGAAGAGTTTCAAGTTTCCATGGAAGAGGGAACAGATTCAGCACATCTGCTTTGGCAGAGGAGGAACTTATCACTCCTGCTGTTCAGATATGTTACACTCAAAATATGATTAATGGCCAGTTTGTAGATGCTGCATCAGGGAAAGTGTTTCCGACCTACGATCCTCGCACCGGGGAAGTGATTGCTCATGTTGCCGAGGCCGAGGCCGAGGATATCAACCGCGCGGTATCGGCAGCACGCAAGGCTTTCGATGAGGGGCCATGGCCGAGAATGACTGCTTATGAGCGATCGAGGGTACTACTGCGGTTTGCGGATTTGGTTGAGAAACATAGCACTGAACTTGCAGCACTGGAAACATGGGACAATGGGAAACCTTACGAACAATCGCTTAGAACCGAAGTACCAGTACTCGTGCGCTTGTTTCACTATTACGCCGGCTGGGCAGACAAAATCCATGGCTTAACAGTTCCAGCTGATGGGAAATATCATGTGCAAGTATTACATGAACCTATTGGAGTTGCAGGTCAGATAATTCCATGGAACTTTCCTCTCCTTATGTTTGCTTGGAAAGTTGGTCCTGCTCTAGCCTGTGGCAACACCATTGTCCTTAAGACTGCAGAGCAAACACCTCTCACTGCTCTTTACGTCGCTAAGTTATTCCACGAGGCTGGTCTTCCTCCAGGGGTTCTGAATGTCGTTTCGGGCTACGGTCCAACAGCTGGTGCTGCCCTTGCTAGCCATATGGATGTGGACAAGCTAGCTTTCACAGGATCGACAAGCACGGGAAAAGTTGTGCTTGAATTGGCAGCTAAAAGCAATTTGAAGCCGGTAACACTAGAGCTCGGAGGGAAATCGCCTTTCATCGTTTTCGAGGACGCAGATGTCGATAAGGCTGTGGAACTTGCTCATTTTGCTCTTTTTTTCAATCAGGGGCAATGTTGTTGTGCTGGATCTCGTACTTTTGTGCATGAGCGCATATACGATGAGTTTGTCGAGAAAGCAAAGGCGCGTGCTGAAAGACGTGTTGTTGGTGACCCTTTCAAGAAGGGTGTTGAACAGGGTCCTCAGATTGACTCGGATCAATTCAAAAAAGTCCTAAGATACATAAAATCTGGCATTGAAAGTGATGCTACTTTGGAATGTGGAGGTGATAGAGTTGGGACTAAGGGATACTTTATCCAGCCAACAGTTTTCTCAAATGTCAAGGACGATATGTTGATAGCAAAGGATGAAATCTTTGGCCCAGTACAATCCATCTTGAAATTCAAGGACATTGATGAAGTAATTCAAAGGGCAAACTCAAGTCGTTACGGTCTAGCTGCTGGAGTTTTCACTACGAACATCGACACAGCCAACACCGTAACACGAGGATTGAGAAGCGGGACGGTGTGGATCAATTGCTTCGACGTATTTGACGCTGCAATACCGTTTGGCGGGTACAAGATGAGTGGAATGGGGAGGGAGAAGGGAATTTACAGCCTCCAAAACTACTTGCAGGTGAAGGCTGTGGTTACTCCTCTGAAGAATCCAGCATGGTTGTGA 1641 46.74 MAARRGITSLLSRSLFSSSSSSGYGFCSLLQSHGRVSSFHGRGNRFSTSALAEEELITPAVQICYTQNMINGQFVDAASGKVFPTYDPRTGEVIAHVAEAEAEDINRAVSAARKAFDEGPWPRMTAYERSRVLLRFADLVEKHSTELAALETWDNGKPYEQSLRTEVPVLVRLFHYYAGWADKIHGLTVPADGKYHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVFEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFVEKAKARAERRVVGDPFKKGVEQGPQIDSDQFKKVLRYIKSGIESDATLECGGDRVGTKGYFIQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIQRANSSRYGLAAGVFTTNIDTANTVTRGLRSGTVWINCFDVFDAAIPFGGYKMSGMGREKGIYSLQNYLQVKAVVTPLKNPAWL 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1523972 1527515 + Hsped.09g01920.1 Hepe09g0192 578876

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0192 546 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 64 538 - GO:0004029(PANTHER)
Hepe09g0192 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 316 505 IPR016163 GO:0016620(InterPro)
Hepe09g0192 546 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 312 319 IPR029510 GO:0016491(InterPro)
Hepe09g0192 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 70 534 IPR016162 GO:0016491(InterPro)
Hepe09g0192 546 CDD ALDH_F2BC 65 538 - -
Hepe09g0192 546 FunFam Mitochondrial aldehyde dehydrogenase 2 318 507 - -
Hepe09g0192 546 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 70 340 - -
Hepe09g0192 546 FunFam Aldehyde dehydrogenase, putative 508 534 - -
Hepe09g0192 546 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 340 351 IPR016160 GO:0016491(InterPro)
Hepe09g0192 546 Pfam Aldehyde dehydrogenase family 74 536 IPR015590 GO:0016491(InterPro)
Hepe09g0192 546 SUPERFAMILY ALDH-like 61 540 IPR016161 GO:0016491(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0192 K00128 - - csv:101209430 969.533
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0653 Hepe-Chr8:5813364 Hepe09g0192 Hepe-Chr9:1523972 2.94e-108 dispersed
Hepe09g0192 Hepe-Chr9:1523972 Hepe09g0747 Hepe-Chr9:7167395 2.16e-198 dispersed
Hepe09g0167 Hepe-Chr9:1327546 Hepe09g0192 Hepe-Chr9:1523972 1.87e-106 transposed
Hepe10g0002 Hepe-Chr10:70450 Hepe09g0192 Hepe-Chr9:1523972 2.81e-304 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g722 . . . . Bpe12g00589 . . . . . . Cma11g00104 . Car11g00103 Sed12g1882 . Cpe04g01548 Bhi02g00432 Tan09g2233 Cmetu05g1877 . Hepe09g0192 . . Cla06g01654 Cam06g1838 Cec06g1889 Cco06g1894 Clacu06g1798 Cmu06g1740 Cre06g2558 . . Cone13ag0133 . . . . . . . . . . . . . . . Cmo11g00105 . . . . . . . . . . . . . . . . . . . . Lsi06g01544 Csa01g00160 Chy02g02570 Cme02g01959
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe09g0747 . 1 502 Aldehyde Dehydrogenase Gene Family AT3G24503 71.8 2.3e-214 741.9
Hepe10g0002 . 31 560 Aldehyde Dehydrogenase Gene Family AT3G24503 51.8 8.1e-159 557.4
Hepe09g0192 . 62 546 Aldehyde Dehydrogenase Gene Family AT3G24503 54.7 4.9e-156 548.1
Hepe09g0192 . 1 546 Aldehyde Dehydrogenase Gene Family AT3G48000 79.7 8.2e-258 886.3
Hepe10g0002 . 1 560 Aldehyde Dehydrogenase Gene Family AT3G48000 71.9 3.1e-241 831.2
Hepe09g0747 . 18 502 Aldehyde Dehydrogenase Gene Family AT3G48000 55.3 3.1e-164 575.5
Hepe10g0002 . 1 404 Aldehyde Dehydrogenase Gene Family AT1G23800 72.3 1.6e-165 579.3
Hepe09g0192 . 1 396 Aldehyde Dehydrogenase Gene Family AT1G23800 72.2 1.0e-164 576.6
Hepe09g0747 . 18 346 Aldehyde Dehydrogenase Gene Family AT1G23800 54.7 3.6e-104 375.6
Hepe01g2295 . 2 415 Aldehyde Dehydrogenase Gene Family AT4G34240 65.9 1.1e-161 567.0
Hepe07g0686 . 5 477 Aldehyde Dehydrogenase Gene Family AT4G34240 50.1 1.4e-132 470.3
Hepe01g2295 . 3 413 Aldehyde Dehydrogenase Gene Family AT1G44170 72.7 6.3e-181 630.6
Hepe07g0686 . 61 475 Aldehyde Dehydrogenase Gene Family AT1G44170 50.6 4.9e-117 418.3
Hepe08g0118 . 66 482 Aldehyde Dehydrogenase Gene Family AT1G44170 50.6 4.9e-117 418.3
Hepe07g0686 . 1 477 Aldehyde Dehydrogenase Gene Family AT4G36250 63.5 3.0e-187 651.7
Hepe08g0118 . 4 484 Aldehyde Dehydrogenase Gene Family AT4G36250 55.5 2.5e-157 552.4
Hepe08g0653 . 32 536 Aldehyde Dehydrogenase Gene Family AT1G79440 76.8 2.5e-235 811.6
Hepe08g0652 . 32 379 Aldehyde Dehydrogenase Gene Family AT1G79440 75.9 6.8e-156 547.7
Hepe02g0702 . 5 489 Aldehyde Dehydrogenase Gene Family AT2G14170 82.5 1.1e-236 816.2
Hepe04g1389 . 177 645 Aldehyde Dehydrogenase Gene Family AT2G14170 65.5 1.5e-183 639.8
Hepe09g0167 . 8 397 Aldehyde Dehydrogenase Gene Family AT1G74920 81.0 6.7e-198 687.2
Hepe09g0167 . 8 399 Aldehyde Dehydrogenase Gene Family AT3G48170 83.9 2.8e-204 708.4
Hepe08g2460 . 1 493 Aldehyde Dehydrogenase Gene Family AT2G24270 89.5 7.1e-264 906.4
Hepe07g2286 . 21 462 Aldehyde Dehydrogenase Gene Family AT5G62530 81.3 5.2e-223 770.8
Hepe03g0048 . 39 595 Aldehyde Dehydrogenase Gene Family AT3G66658 75.5 3.3e-260 894.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001596 2 4 2 1 4 2 3 2 2 1 2 2 3 1 2 3 2 3 3 2 2 3 2 2 2 2 2 2 3 5 71