Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g0192 | ATGGCTGCTCGTAGAGGAATCACTTCTTTACTCTCTCGTTCTCTCTTTTCTTCTTCTTCTTCTTCTGGTTATGGGTTTTGTTCTCTTCTTCAATCTCATGGAAGAGTTTCAAGTTTCCATGGAAGAGGGAACAGATTCAGCACATCTGCTTTGGCAGAGGAGGAACTTATCACTCCTGCTGTTCAGATATGTTACACTCAAAATATGATTAATGGCCAGTTTGTAGATGCTGCATCAGGGAAAGTGTTTCCGACCTACGATCCTCGCACCGGGGAAGTGATTGCTCATGTTGCCGAGGCCGAGGCCGAGGATATCAACCGCGCGGTATCGGCAGCACGCAAGGCTTTCGATGAGGGGCCATGGCCGAGAATGACTGCTTATGAGCGATCGAGGGTACTACTGCGGTTTGCGGATTTGGTTGAGAAACATAGCACTGAACTTGCAGCACTGGAAACATGGGACAATGGGAAACCTTACGAACAATCGCTTAGAACCGAAGTACCAGTACTCGTGCGCTTGTTTCACTATTACGCCGGCTGGGCAGACAAAATCCATGGCTTAACAGTTCCAGCTGATGGGAAATATCATGTGCAAGTATTACATGAACCTATTGGAGTTGCAGGTCAGATAATTCCATGGAACTTTCCTCTCCTTATGTTTGCTTGGAAAGTTGGTCCTGCTCTAGCCTGTGGCAACACCATTGTCCTTAAGACTGCAGAGCAAACACCTCTCACTGCTCTTTACGTCGCTAAGTTATTCCACGAGGCTGGTCTTCCTCCAGGGGTTCTGAATGTCGTTTCGGGCTACGGTCCAACAGCTGGTGCTGCCCTTGCTAGCCATATGGATGTGGACAAGCTAGCTTTCACAGGATCGACAAGCACGGGAAAAGTTGTGCTTGAATTGGCAGCTAAAAGCAATTTGAAGCCGGTAACACTAGAGCTCGGAGGGAAATCGCCTTTCATCGTTTTCGAGGACGCAGATGTCGATAAGGCTGTGGAACTTGCTCATTTTGCTCTTTTTTTCAATCAGGGGCAATGTTGTTGTGCTGGATCTCGTACTTTTGTGCATGAGCGCATATACGATGAGTTTGTCGAGAAAGCAAAGGCGCGTGCTGAAAGACGTGTTGTTGGTGACCCTTTCAAGAAGGGTGTTGAACAGGGTCCTCAGATTGACTCGGATCAATTCAAAAAAGTCCTAAGATACATAAAATCTGGCATTGAAAGTGATGCTACTTTGGAATGTGGAGGTGATAGAGTTGGGACTAAGGGATACTTTATCCAGCCAACAGTTTTCTCAAATGTCAAGGACGATATGTTGATAGCAAAGGATGAAATCTTTGGCCCAGTACAATCCATCTTGAAATTCAAGGACATTGATGAAGTAATTCAAAGGGCAAACTCAAGTCGTTACGGTCTAGCTGCTGGAGTTTTCACTACGAACATCGACACAGCCAACACCGTAACACGAGGATTGAGAAGCGGGACGGTGTGGATCAATTGCTTCGACGTATTTGACGCTGCAATACCGTTTGGCGGGTACAAGATGAGTGGAATGGGGAGGGAGAAGGGAATTTACAGCCTCCAAAACTACTTGCAGGTGAAGGCTGTGGTTACTCCTCTGAAGAATCCAGCATGGTTGTGA | 1641 | 46.74 | MAARRGITSLLSRSLFSSSSSSGYGFCSLLQSHGRVSSFHGRGNRFSTSALAEEELITPAVQICYTQNMINGQFVDAASGKVFPTYDPRTGEVIAHVAEAEAEDINRAVSAARKAFDEGPWPRMTAYERSRVLLRFADLVEKHSTELAALETWDNGKPYEQSLRTEVPVLVRLFHYYAGWADKIHGLTVPADGKYHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVFEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFVEKAKARAERRVVGDPFKKGVEQGPQIDSDQFKKVLRYIKSGIESDATLECGGDRVGTKGYFIQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIQRANSSRYGLAAGVFTTNIDTANTVTRGLRSGTVWINCFDVFDAAIPFGGYKMSGMGREKGIYSLQNYLQVKAVVTPLKNPAWL | 546 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1523972 | 1527515 | + | Hsped.09g01920.1 | Hepe09g0192 | 578876 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g0192 | 546 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 64 | 538 | - | GO:0004029(PANTHER) | |
| Hepe09g0192 | 546 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 316 | 505 | IPR016163 | GO:0016620(InterPro) | |
| Hepe09g0192 | 546 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 312 | 319 | IPR029510 | GO:0016491(InterPro) | |
| Hepe09g0192 | 546 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 70 | 534 | IPR016162 | GO:0016491(InterPro) | |
| Hepe09g0192 | 546 | CDD | ALDH_F2BC | 65 | 538 | - | - | |
| Hepe09g0192 | 546 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 318 | 507 | - | - | |
| Hepe09g0192 | 546 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 70 | 340 | - | - | |
| Hepe09g0192 | 546 | FunFam | Aldehyde dehydrogenase, putative | 508 | 534 | - | - | |
| Hepe09g0192 | 546 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 340 | 351 | IPR016160 | GO:0016491(InterPro) | |
| Hepe09g0192 | 546 | Pfam | Aldehyde dehydrogenase family | 74 | 536 | IPR015590 | GO:0016491(InterPro) | |
| Hepe09g0192 | 546 | SUPERFAMILY | ALDH-like | 61 | 540 | IPR016161 | GO:0016491(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe08g0653 | Hepe-Chr8:5813364 | Hepe09g0192 | Hepe-Chr9:1523972 | 2.94e-108 | dispersed | |
| Hepe09g0192 | Hepe-Chr9:1523972 | Hepe09g0747 | Hepe-Chr9:7167395 | 2.16e-198 | dispersed | |
| Hepe09g0167 | Hepe-Chr9:1327546 | Hepe09g0192 | Hepe-Chr9:1523972 | 1.87e-106 | transposed | |
| Hepe10g0002 | Hepe-Chr10:70450 | Hepe09g0192 | Hepe-Chr9:1523972 | 2.81e-304 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g0192 | K00128 | - | csv:101209430 | 969.533 |