Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0193 ATGAAGGAGAACAATGATGGATTTGTGCGGGCGGATCAGATTGATCTCAAGAGCTTGGATGAACAACTTGAGAGGCATCTTAGCAGAGCCTTGACTATGGAGAAGAACAAGAAGAAAGATGAAGACGGTAATAATAGCTTTCTCACTTCCGCTGCCATCGCTCGCAGTAGGTCTACTAAAGTCGCCGCTAAAGAGCGGCAGGAATGGGAGATCGATCCGTCCAAATTGATTATCAAGACCGTCATTGCTCGTGGTACTTTCGGCACCGTCCACCGCGGCGTTTACGATGGACTAGATGTCGCCGTCAAGTTGCTGGATTGGGGAGAAGAAGGTCACAGGACAGAAGCTGAAATTGCTTCGCTAAGAGCAGCTTTTAAACAGGAAGTCGCTGTTTGGCATAAACTCGAGCATCCCAATGTTACTAAGTTTATAGGGGCAACAATGGGATCGGCGGAGTTACAGATCCAAACTGAAAATGGTCTAATAGGCATGCCAAGTAACATATGTTGTGTTGTGGTGGAATATCTCGCCGGAGGTGCCCTTAAATCTTATCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAGCTGGCACTTGATCTTGCTAGAGGGTTGAGTTACCTTCATTCACAGAAGATTGTTCACAGAGATGTAAAGACAGAAAACATGCTGTTGGACAAAACACGCACAGTCAAAATTGCTGATTTTGGCGTTGCTAGAGTTGAGGCCTCAAATCCCAACGACATGACTGGGGAGACCGGGACACTCGGTTATATGGCTCCCGAGGTTCTCAATGGCAACCCATATAACAGGAAGTGCGATGTGTACAGCTTCGGTATCTGCCTGTGGGAAATCTATTGCTGTGACATGCCATATCCCGACCTTAGTTTCTCCGAAGTGACTTCTGCTGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCGAGCTCTCTAGCAAATGTGATGAAGCGTTGCTGGGACGCGACCCCGGACAAGCGGCCGGAGATGGATGAAGCAGTTTCCATGTTGGAGGCCATTGACACATCCAAGGGTGGAGGTATGATCCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGGCCCTAG 1140 48.07 MKENNDGFVRADQIDLKSLDEQLERHLSRALTMEKNKKKDEDGNNSFLTSAAIARSRSTKVAAKERQEWEIDPSKLIIKTVIARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFKQEVAVWHKLEHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEAVSMLEAIDTSKGGGMIPVDQAQGCLCFRKYRGP 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1528848 1532752 - Hsped.09g01930.1 Hepe09g0193 578877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0193 379 FunFam Serine/threonine-protein kinase HT1 176 361 - -
Hepe09g0193 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 351 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Hepe09g0193 379 FunFam Kinase suppressor of Ras 1 65 160 - -
Hepe09g0193 379 CDD STKc_MAP3K-like 82 350 - -
Hepe09g0193 379 Coils Coil 16 36 - -
Hepe09g0193 379 Gene3D Phosphorylase Kinase; domain 1 64 159 - -
Hepe09g0193 379 Gene3D Transferase(Phosphotransferase) domain 1 177 366 - -
Hepe09g0193 379 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 SMART serkin_6 76 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 SUPERFAMILY Protein kinase-like (PK-like) 59 350 IPR011009 -
Hepe09g0193 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0193 379 Pfam Protein tyrosine and serine/threonine kinase 78 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g2024 Hepe-Chr3:77558104 Hepe09g0193 Hepe-Chr9:1528848 2.58e-141 dispersed
Hepe05g1576 Hepe-Chr5:65319680 Hepe09g0193 Hepe-Chr9:1528848 1.58e-182 dispersed
Hepe09g0193 Hepe-Chr9:1528848 Hepe09g0241 Hepe-Chr9:2088187 4.55e-50 dispersed
Hepe02g1834 Hepe-Chr2:28060911 Hepe09g0193 Hepe-Chr9:1528848 3.61e-242 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73105 PF07714 PK_Tyr_Ser-Thr 1.40E-62 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0193 - - - 0.0