Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0218 ATGCCTGTAAATTCATGGACCCTCCCTTCATCTATCCTAATCCTCTGTTTTTCACTCCTATATCCCTTCCCTCTCCCAACTTCCGCCATTAACGAACAGGGTCAAGCTCTACTCATTTGGAAGCTAAGTTTCAATGGATCAAACGAAGTACTACACAATTGGGATCCTAACAATGAAACTCCATGTGGGTGGTTTGGAATCACTTGCAACAAAAACAGACAAGTAGTAGAAGTAGTTTTGAGGAACGTGAACTTACCTGGTGAGCTTCCATGGAATTTCTCTCCACTGTGGTCTTTGAACAAGCTCGTCTTGTCGGGAGTAAACCTCACTGGCTCCATTCCTAAAGAGATTTCTGTTCTCAGCCAGCTGCATACCTTGGAACTCAGTGACAATGGCTTGACTGGAGAAATCCCAAGTGACATATGTTCCTTGCTAAATCTCCAACAGCTTTACCTGAATTCAAATCATTTTGAAGGATCAATTCCTGCAGGGATCGGGAATCTCACAAATTTGAAGGAGATGATTCTCTATGATAATCAGTTAAGTGGGGAAATTCCAATTAGCATAGGAAATTTGAAGCAGCTTGAAGTAATTAGAGCTGGAGGGAATAAGAACTTACTTGGTTCTGTGCCGGAAGAGATTGGAAACTGCAGCAATTTGGTGATTCTTGGTCTTGCTGAAACAAGCATTTCTGGGTTTCTTCCATCTAGTCTTGGATTTCTCAAGAAGCTTCAGACATTGGCAATCTATACTGCTCTTCTCTCCGGCCAGATTCCTCATGAACTTGGCGATTGCACTGAGCTTCAAAATCTCTACCTCTATGAGAATTCGCTTTCCGGCTCGATCCCGAGCTCGTTAGGAAGGTTACGAAATCTCCAGAGTCTCCTTCTATGGCAGAATGATTTGGTCGGCGTTATACCACCGGAGCTAGGTGGATGTGAACAGTTGTTAGTCATGGACATTTCGATTAATTCCCTGACGGGAAGCATTCCTTCAACATTTGGGAACTTAACATTGCTTCAAGAATTGCAACTGAGTTCAAATCAATTGTCCGGTGAGATTCCGAAGGAGATCGGGAACTGTCCGGGAATCACTCACATCGAGCTTGATAATAACCAGTTAACTGGTACGATCCCATCTGAATTGGGAAATCTCACCAATCTGGCATTGCTTTTCTTGTGGCTAAACAAGCTCGAGGGAAGTATTCCATCCGCCATTTCCAATTGTCACGATCTCGAGGCTGTGGATTTCTCACTGAACGCCTTGACAGGTTCAATTCCGACGGGATTTTTCCAGTTGAAGAAGCTTTCCAAGCTTCTGCTCCTCTCCAATAATCTCTCCGGCGTGATACCGCCGGCAATCGGTAACTGTTCGTCTCTATTTCGGTTCCGAGCGAATAACAACAAGCTCACAGGGGAAATTCCGCCGGAGATTGGGAATTTGAAGAACTTGATTTTCCTGGACCTCGGAAACAATCGCCTCACTGGAGCGTTGCCTCCGGAGATTTCCGGCTGTCGAAATTTGACATTCCTCGATTTACATTCCAACTCTCTAACAAAATTTCTTCCGGAAGAATTCAACCAGCTTTCTTCTCTCCAGTACGTTGATCTCTCGAATAATCTAATCGAAGGGACGCCGAAACCAAGTTTTGGATCTTTCAATTCGCTCACGAAACTCGTTCTCTCAAACAACCGCTTCTCGGGCCCTATACCAACTGAAATCGGTTCCTGCTTGAAACTTCAGTTATTGGATTTAAGTTGCAATCAGCTCTCCGGGAATATTCCTCCGAGCTTGGGCAAGATTCCTTCACTCGAAATCGGTCTCAATCTGAGCTTGAACCAACTATCCGGTGAGATTCCACCGGAGTTTGCAAATTTTGACAAGCTCGGATCATTGGACATTTCTTACAACCAGCTCTCCGGCGACCTCCACATTCTCACAGACCTGCAAAATCTCGTAGTCCTCAATGTATCACACAACAATTTCTCAGGACGCGTACCAGAGACGCCATTCTTCACGCAGCTCCCTCTGAGCGTCTTCTCGGGGAATCCGGACTTATGCTTCGCCGGCGAAAAATGCTACGCCGATAACCACAGCGGCGGTGCTCGCCACACGCTAGCGGCTCGAGTGGCCATGGTGGTGTTACTGTGCACGGCGTGCGCACTGCTACTAGCAGCAGTTTATATCATTCTCAAAGATAGACATTCATGTCGAAGATGCTTCATTGGGTCCCGTGGTGAAGATCCAGACAACACCTTCGACAGCGACCTGGAGCTTGGCTCAGGCTGGGAAGTGACACTATACCAGAAGCTCGATCTCTCAATCTCCGACGTAATCAACTGCTTAACGCCGGCCAACATCATCGGCCGCGGAAAGACCGGCGTGGTGTACAGAGCCTGCATCTCATCAGGTCTAATAATCGCTGTGAAGCGATTCCGAACATCGGAAAAGTTCTCGGCGGCGGCGTTTTCATCAGAAATCGCAACATTGGCGAGGATCCGGCACCGGAACATCGTCCGATTGTTAGGGTGGGGGGCGAATCGGAGGACGAAGTTGCTGTTCTACGATTACTTGCCGAATGGGAATTTGGGCGCGTTGTTACACGAGGGGAATGGGCGCGTGGGGCTGGACTGGGAGAGTAGGTTCAAGATAGCGTTGGGAGTGGCGGAGGGAGTGGCTTATTTGCACCACGACTGCGTGCCGGCGATATTGCACCGGGACGTGAAGGCTCACAACATTCTGTTGGGGGATCGCTACGAGGCGTGTTTGGCGGACTTTGGGCTCGCTCGCTTGGTTGAAGATGGTCCGAGTGGCTCGTCTTCAGCGAACCCACAGTTCGCTGGGTCCTATGGCTATTTTGCACCTGAATATGGGTGCATGTTAAGGATCACAGAAAAGAGCGACGTGTACAGCTACGGTGTCGTTTTACTAGAGATAATAACCGGAAAAAAGCCAGCAGACTCTTCATTCGCAGAGGGTCAGCACGTGATACAATGGGTGCGGGATCATTTAAAGAAGAAGAAGGATCCAGTTTCAGTTATGGATCCGAAACTCCAGGGTCAATCTGACCCGCAAATCCAGGAGATTCTTCAGGCATTAGGAATCTCCCTCCTCTGCACCAGTGACCGCCCTGAAGACCGGCCGACGATGAAAGATGTGGCGGCTCTTCTACGTGAGATCCGACAGGACCTGCCGCCGTCTGCGACGGACGCCGCTGACAAGCCACCACGAAACAACAATAGCATTAGCAACGCTACAAGTTTCGACGGAGCGACGTCATTTTCGTCGTCCTCTTCTACGACACGTGCGAGTCATTTGCTTTTCACGTTACCGCTTCAGGAATCGTCACGTTGCTCCTATGCTTCTTTGTCGTCGTCAGGCGTGTATATTCCACGCAAACAATAA 3405 48.4 MPVNSWTLPSSILILCFSLLYPFPLPTSAINEQGQALLIWKLSFNGSNEVLHNWDPNNETPCGWFGITCNKNRQVVEVVLRNVNLPGELPWNFSPLWSLNKLVLSGVNLTGSIPKEISVLSQLHTLELSDNGLTGEIPSDICSLLNLQQLYLNSNHFEGSIPAGIGNLTNLKEMILYDNQLSGEIPISIGNLKQLEVIRAGGNKNLLGSVPEEIGNCSNLVILGLAETSISGFLPSSLGFLKKLQTLAIYTALLSGQIPHELGDCTELQNLYLYENSLSGSIPSSLGRLRNLQSLLLWQNDLVGVIPPELGGCEQLLVMDISINSLTGSIPSTFGNLTLLQELQLSSNQLSGEIPKEIGNCPGITHIELDNNQLTGTIPSELGNLTNLALLFLWLNKLEGSIPSAISNCHDLEAVDFSLNALTGSIPTGFFQLKKLSKLLLLSNNLSGVIPPAIGNCSSLFRFRANNNKLTGEIPPEIGNLKNLIFLDLGNNRLTGALPPEISGCRNLTFLDLHSNSLTKFLPEEFNQLSSLQYVDLSNNLIEGTPKPSFGSFNSLTKLVLSNNRFSGPIPTEIGSCLKLQLLDLSCNQLSGNIPPSLGKIPSLEIGLNLSLNQLSGEIPPEFANFDKLGSLDISYNQLSGDLHILTDLQNLVVLNVSHNNFSGRVPETPFFTQLPLSVFSGNPDLCFAGEKCYADNHSGGARHTLAARVAMVVLLCTACALLLAAVYIILKDRHSCRRCFIGSRGEDPDNTFDSDLELGSGWEVTLYQKLDLSISDVINCLTPANIIGRGKTGVVYRACISSGLIIAVKRFRTSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLGALLHEGNGRVGLDWESRFKIALGVAEGVAYLHHDCVPAILHRDVKAHNILLGDRYEACLADFGLARLVEDGPSGSSSANPQFAGSYGYFAPEYGCMLRITEKSDVYSYGVVLLEIITGKKPADSSFAEGQHVIQWVRDHLKKKKDPVSVMDPKLQGQSDPQIQEILQALGISLLCTSDRPEDRPTMKDVAALLREIRQDLPPSATDAADKPPRNNNSISNATSFDGATSFSSSSSTTRASHLLFTLPLQESSRCSYASLSSSGVYIPRKQ 1134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1858711 1864291 - Hsped.09g02180.1 Hepe09g0218 578902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0218 1134 SMART LRR_typ_2 289 313 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 433 457 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 506 528 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 120 144 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 481 505 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 385 409 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 529 552 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 649 682 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 168 192 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 337 361 IPR003591 -
Hepe09g0218 1134 SMART LRR_typ_2 553 577 IPR003591 -
Hepe09g0218 1134 Pfam Protein kinase domain 786 1053 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0218 1134 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 858 1074 - -
Hepe09g0218 1134 Gene3D Ribonuclease Inhibitor 202 426 IPR032675 -
Hepe09g0218 1134 Gene3D Transferase(Phosphotransferase) domain 1 858 1080 - -
Hepe09g0218 1134 ProSitePatterns Protein kinases ATP-binding region signature. 788 810 IPR017441 GO:0005524(InterPro)
Hepe09g0218 1134 Gene3D Phosphorylase Kinase; domain 1 764 857 - -
Hepe09g0218 1134 MobiDBLite consensus disorder prediction 1065 1098 - -
Hepe09g0218 1134 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 411 697 - -
Hepe09g0218 1134 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Hepe09g0218 1134 Gene3D Ribonuclease Inhibitor 523 605 IPR032675 -
Hepe09g0218 1134 Gene3D Ribonuclease Inhibitor 427 522 IPR032675 -
Hepe09g0218 1134 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 319 1054 IPR052592 -
Hepe09g0218 1134 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Hepe09g0218 1134 SUPERFAMILY L domain-like 365 692 - -
Hepe09g0218 1134 Gene3D Ribonuclease Inhibitor 606 676 IPR032675 -
Hepe09g0218 1134 Pfam Leucine rich repeat 506 566 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine rich repeat 316 374 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 903 915 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0218 1134 FunFam Predicted protein 186 282 - -
Hepe09g0218 1134 FunFam Nuclear pore complex protein NUP107 30 185 - -
Hepe09g0218 1134 SMART serkin_6 782 1057 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0218 1134 SUPERFAMILY Protein kinase-like (PK-like) 773 1057 IPR011009 -
Hepe09g0218 1134 SUPERFAMILY L domain-like 56 397 - -
Hepe09g0218 1134 Pfam Leucine Rich Repeat 579 600 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 170 192 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 651 669 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 483 505 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 268 289 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 123 144 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 Pfam Leucine Rich Repeat 608 626 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 MobiDBLite consensus disorder prediction 1073 1098 - -
Hepe09g0218 1134 ProSiteProfiles Protein kinase domain profile. 782 1057 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0218 1134 ProSiteProfiles Leucine-rich repeat profile. 507 528 IPR001611 GO:0005515(InterPro)
Hepe09g0218 1134 FunFam Predicted protein 283 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1730 Hepe-Chr5:67530918 Hepe09g0218 Hepe-Chr9:1858711 3.63e-107 dispersed
Hepe09g0218 Hepe-Chr9:1858711 Hepe10g1910 Hepe-Chr10:55903880 7.13e-98 dispersed
Hepe09g0218 Hepe-Chr9:1858711 Hepe04g1362 Hepe-Chr4:69258205 8.67e-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73106 PF00069 Pkinase 1.10E-39 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0218 - - - 0.0