Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0241 ATGGAAGCTGGGAGTAGATTCTACTCTGCTACGGATGAGTTCAGATTGGAAGCGAAATGGCTGGTTGATCCCAAACATCTCTTTGTTGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGTTGATGAGGTTGCAAAGAAAGATTCTCGGTTTGCTCGAGAGGTTGCAATGTTGTCTAAAGTACAACATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCGGTAATGGTGATAGTGACCGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGTCCACGGTGCTTGGACACACGTGTGGCGGTTGGTTTTGCACTTGATATTGCTCGTGCAATGGAATGCCTGCACTCTCATGGCATCATTCACCGTGATCTGAAACCTGAAAACCTACTGTTGACTGCAGATCACAAAACAGTTAAGTTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCGGAAACGGGGACCTACCGATGGATGGCTCCAGAGTTGTACAGCACTGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCAATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTTCCTGAGGAACTGGCTATCGTTCTAACATCGTGCTGGCAGGAGGATGCGAATGCTCGTCCGAATTTCACCCAAATTATCCAAATGCTACTCAATTACCTTTACACCATTTCACCCCCCGAGCCGATGATTCCTTCCCGACTTTTCTCTTCTGAAAACACGGTGTTTCCTCCTGAGTCTCCCGGAACAAGCTCACTGATGGCAATCCGTGACGATTCAGGGGACACCCCAAAAGCTAAAAAGGAAAATAAGCCCAGAGGTTGTTTCTTCTGCTCCAATGACTGTTTCTAA 1062 45.48 MEAGSRFYSATDEFRLEAKWLVDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETVDEVAKKDSRFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAIVLTSCWQEDANARPNFTQIIQMLLNYLYTISPPEPMIPSRLFSSENTVFPPESPGTSSLMAIRDDSGDTPKAKKENKPRGCFFCSNDCF 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2088187 2091770 + Hsped.09g02410.1 Hepe09g0241 578925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0241 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 PANTHER SERINE-THREONINE PROTEIN KINASE 22 288 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe09g0241 353 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 Pfam Protein tyrosine and serine/threonine kinase 32 287 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Hepe09g0241 353 FunFam serine/threonine-protein kinase HT1 108 307 - -
Hepe09g0241 353 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524(InterPro)
Hepe09g0241 353 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 FunFam Kinase suppressor of Ras 1 16 106 - -
Hepe09g0241 353 CDD STKc_MAP3K-like 33 287 - -
Hepe09g0241 353 SMART serkin_6 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0241 353 Gene3D Transferase(Phosphotransferase) domain 1 108 296 - -
Hepe09g0241 353 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Hepe09g0241 353 MobiDBLite consensus disorder prediction 315 340 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1774 Hepe-Chr2:25411598 Hepe09g0241 Hepe-Chr9:2088187 1.23e-152 dispersed
Hepe04g1490 Hepe-Chr4:70535241 Hepe09g0241 Hepe-Chr9:2088187 4.41e-102 dispersed
Hepe05g0029 Hepe-Chr5:289635 Hepe09g0241 Hepe-Chr9:2088187 6.01e-144 dispersed
Hepe08g2053 Hepe-Chr8:57646493 Hepe09g0241 Hepe-Chr9:2088187 3.62e-72 dispersed
Hepe09g0193 Hepe-Chr9:1528848 Hepe09g0241 Hepe-Chr9:2088187 4.55e-50 dispersed
Hepe09g0241 Hepe-Chr9:2088187 Hepe10g1553 Hepe-Chr10:52258371 5.00e-26 dispersed
Hepe10g1770 Hepe-Chr10:54466366 Hepe09g0241 Hepe-Chr9:2088187 2.29e-40 wgd
Hepe02g3073 Hepe-Chr2:79888743 Hepe09g0241 Hepe-Chr9:2088187 6.99e-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73108 PF07714 PK_Tyr_Ser-Thr 1.70E-57 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0241 - - - 0.0