Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0277 | ATGATGAGAAATTCAAAAGAAAAGGGTTGTGAAGCAAAAGAAGAAGAAGGAATAAATATGAGTGATAATGGAAAATATAGTTTCCCAAAGGCTCCAACAAGTTCAAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAGCCTAGCAAGGTCATAGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATACCGACTGCATTCTCTCATCCGCCGTCGTTTCACCAACAGATGCTCTTCCCAACAACTCAATATGATCATCATTATTCTACTACTACTACTACTACTTCTTCTTCATCCCAATTTTGTTCGCTCCCTCCTCCGTCTCCCTTCGCCCTTGACATGAAGGATTCTTCTTCCAGGTCCGTTGCGAATCAAACGACACCGATGGGGAAAACGAAGCTTTGGGATATGGATTTAGCTGCAATGAGAGCGACGGTACTACAAGAAAAAGCATCGTCTTCAGCGACGAATAAAGGGAAGTGGATTGATGGAAGTAGTAGTAATACTAATCAACAAGTTGAAGATCATTACAATGATCAGCCAATTTCAGCTCAAAAGCTCTTATCAATAATGCCCAATTCTAATGCTTACAATTACAACACTTCTGATAATCAATTTGGGAACAATAATAACAATGGAGTTTTTCCATCACAAGTTGAGGCTCAAACAAGTAATAATTCATCTTCTAGTTCTTCACTCTTCTTCACTCCCTATGCTTCATACATCACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCACATCCTTTGTCCAATAATCCCTTCATGTCAGCTTCTTCAACTCTTCACCCTTTTGCCTCACACAACTTGAAACCCTTTCCACCTCCAAATTTCAATCTCAAGCACCTTTTTCATGCCGACAACAATAACAACGCCGACTCCGGTAAAGACGGGGCGGGGGCGCCCGGTAACTGA | 1110 | 41.44 | MMRNSKEKGCEAKEEEGINMSDNGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPTAFSHPPSFHQQMLFPTTQYDHHYSTTTTTTSSSSQFCSLPPPSPFALDMKDSSSRSVANQTTPMGKTKLWDMDLAAMRATVLQEKASSSATNKGKWIDGSSSNTNQQVEDHYNDQPISAQKLLSIMPNSNAYNYNTSDNQFGNNNNNGVFPSQVEAQTSNNSSSSSSLFFTPYASYITNPFESHIHFLSSNSHPLSNNPFMSASSTLHPFASHNLKPFPPPNFNLKHLFHADNNNNADSGKDGAGAPGN | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2386310 | 2387419 | + | Hsped.09g02770.1 | Hepe09g0277 | 578961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0277 | 369 | MobiDBLite | consensus disorder prediction | 205 | 228 | - | - | |
Hepe09g0277 | 369 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Hepe09g0277 | 369 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Hepe09g0277 | 369 | MobiDBLite | consensus disorder prediction | 346 | 369 | - | - | |
Hepe09g0277 | 369 | ProSiteProfiles | TCP domain profile. | 55 | 113 | IPR017887 | - | |
Hepe09g0277 | 369 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 34 | 322 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER) | |
Hepe09g0277 | 369 | Pfam | TCP family transcription factor | 55 | 201 | IPR017887 | - | |
Hepe09g0277 | 369 | MobiDBLite | consensus disorder prediction | 256 | 283 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g2008 | Hepe-Chr4:74879838 | Hepe09g0277 | Hepe-Chr9:2386310 | 2.78e-22 | dispersed | |
Hepe08g0578 | Hepe-Chr8:5067506 | Hepe09g0277 | Hepe-Chr9:2386310 | 1.02e-16 | dispersed | |
Hepe09g0277 | Hepe-Chr9:2386310 | Hepe09g0324 | Hepe-Chr9:2816055 | 5.53e-10 | dispersed | |
Hepe02g0930 | Hepe-Chr2:11222787 | Hepe09g0277 | Hepe-Chr9:2386310 | 1.50e-36 | wgd | |
Hepe07g2456 | Hepe-Chr7:68894740 | Hepe09g0277 | Hepe-Chr9:2386310 | 9.71e-39 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56334 | PF03634 | TCP | 5.90E-23 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0277 | - | - | - | 0.0 |