Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0277 ATGATGAGAAATTCAAAAGAAAAGGGTTGTGAAGCAAAAGAAGAAGAAGGAATAAATATGAGTGATAATGGAAAATATAGTTTCCCAAAGGCTCCAACAAGTTCAAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAGCCTAGCAAGGTCATAGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATACCGACTGCATTCTCTCATCCGCCGTCGTTTCACCAACAGATGCTCTTCCCAACAACTCAATATGATCATCATTATTCTACTACTACTACTACTACTTCTTCTTCATCCCAATTTTGTTCGCTCCCTCCTCCGTCTCCCTTCGCCCTTGACATGAAGGATTCTTCTTCCAGGTCCGTTGCGAATCAAACGACACCGATGGGGAAAACGAAGCTTTGGGATATGGATTTAGCTGCAATGAGAGCGACGGTACTACAAGAAAAAGCATCGTCTTCAGCGACGAATAAAGGGAAGTGGATTGATGGAAGTAGTAGTAATACTAATCAACAAGTTGAAGATCATTACAATGATCAGCCAATTTCAGCTCAAAAGCTCTTATCAATAATGCCCAATTCTAATGCTTACAATTACAACACTTCTGATAATCAATTTGGGAACAATAATAACAATGGAGTTTTTCCATCACAAGTTGAGGCTCAAACAAGTAATAATTCATCTTCTAGTTCTTCACTCTTCTTCACTCCCTATGCTTCATACATCACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCACATCCTTTGTCCAATAATCCCTTCATGTCAGCTTCTTCAACTCTTCACCCTTTTGCCTCACACAACTTGAAACCCTTTCCACCTCCAAATTTCAATCTCAAGCACCTTTTTCATGCCGACAACAATAACAACGCCGACTCCGGTAAAGACGGGGCGGGGGCGCCCGGTAACTGA 1110 41.44 MMRNSKEKGCEAKEEEGINMSDNGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPTAFSHPPSFHQQMLFPTTQYDHHYSTTTTTTSSSSQFCSLPPPSPFALDMKDSSSRSVANQTTPMGKTKLWDMDLAAMRATVLQEKASSSATNKGKWIDGSSSNTNQQVEDHYNDQPISAQKLLSIMPNSNAYNYNTSDNQFGNNNNNGVFPSQVEAQTSNNSSSSSSLFFTPYASYITNPFESHIHFLSSNSHPLSNNPFMSASSTLHPFASHNLKPFPPPNFNLKHLFHADNNNNADSGKDGAGAPGN 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2386310 2387419 + Hsped.09g02770.1 Hepe09g0277 578961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0277 369 MobiDBLite consensus disorder prediction 205 228 - -
Hepe09g0277 369 MobiDBLite consensus disorder prediction 1 26 - -
Hepe09g0277 369 MobiDBLite consensus disorder prediction 1 20 - -
Hepe09g0277 369 MobiDBLite consensus disorder prediction 346 369 - -
Hepe09g0277 369 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Hepe09g0277 369 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 322 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Hepe09g0277 369 Pfam TCP family transcription factor 55 201 IPR017887 -
Hepe09g0277 369 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2008 Hepe-Chr4:74879838 Hepe09g0277 Hepe-Chr9:2386310 2.78e-22 dispersed
Hepe08g0578 Hepe-Chr8:5067506 Hepe09g0277 Hepe-Chr9:2386310 1.02e-16 dispersed
Hepe09g0277 Hepe-Chr9:2386310 Hepe09g0324 Hepe-Chr9:2816055 5.53e-10 dispersed
Hepe02g0930 Hepe-Chr2:11222787 Hepe09g0277 Hepe-Chr9:2386310 1.50e-36 wgd
Hepe07g2456 Hepe-Chr7:68894740 Hepe09g0277 Hepe-Chr9:2386310 9.71e-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56334 PF03634 TCP 5.90E-23 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0277 - - - 0.0