Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0278 ATGAATTTTGAAAATGTTGAAGATATGATTCAGAAGCTTAGACGCTTGAACTCACATCGCTATGAAGCAGGAAAAGATTATATTGGATTGTTGTGTGAGAATACTAATCCAGATCACAGATACATCTCAGAGATACTGTTAGCTTCTGGCCTTCTACTCCAAGATCTTGGCTCTGGCCTGACCACATTTCAGCTTCATCCTTCTGGTAATCCCATCAACCCCGAGTTATTCCACGTTTTGGAGAAAACAAAAGTGGGCGATTTGCCACCAACAGAAGGGTTCAGCCCTGCAAGAGCTTCCTATTCAAACAGGGAGAAATTTCATCGCAAGCTCATATTTGATGCTGTAAATGAGATACTTTTTGAAAAATTAGCTCTCACTGATAGTGGTGGTGCTCCTGAGCCATGGTTGAAACCAACAAAGATTGCAAAAGAAGCCCTTAGTGGACAAAAGATCTTGAAACAATTGTGTAATGAAATAGAACAGTTCCAAGCCAAGAAGTTCGAATGCAACTTCGACGAAGTGAAGGATGACTCGAGAAGCATTCTGCAAGACGATGTGATGCGCCAGTCTGGGAGTTGGACAGATTTTCATGGTGAGGTCTACGATGTCGTGTTAGATGTCGAGCGATTGATATTCAAAGACTTGGTTAATGAGATTGTTATTCGGTGA 672 41.52 MNFENVEDMIQKLRRLNSHRYEAGKDYIGLLCENTNPDHRYISEILLASGLLLQDLGSGLTTFQLHPSGNPINPELFHVLEKTKVGDLPPTEGFSPARASYSNREKFHRKLIFDAVNEILFEKLALTDSGGAPEPWLKPTKIAKEALSGQKILKQLCNEIEQFQAKKFECNFDEVKDDSRSILQDDVMRQSGSWTDFHGEVYDVVLDVERLIFKDLVNEIVIR 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2392404 2393075 - Hsped.09g02780.1 Hepe09g0278 578962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0278 223 Pfam Domain of unknown function (DUF4378) 38 219 IPR025486 -
Hepe09g0278 223 PANTHER LONGIFOLIA PROTEIN 2 221 IPR033334 GO:0051513(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1971 Hepe-Chr6:70942109 Hepe09g0278 Hepe-Chr9:2392404 1.59e-08 dispersed
Hepe02g3207 Hepe-Chr2:81643720 Hepe09g0278 Hepe-Chr9:2392404 3.68e-36 wgd
Hepe07g2455 Hepe-Chr7:68887631 Hepe09g0278 Hepe-Chr9:2392404 8.14e-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0278 - - - 0.0