Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0285 ATGAGCTCCCGGCGCTCCGCTTCCACCGGATCCGTCGCCGAACTCACCGCCTTTTCCGTCTCGGTTCTCTTCCTACTCTCTACCTTCAGTTTCACTTCAACAGAAGCCTATGATGCACTTGATCCCAACGGGAACATCACAATCAAATGGGATGTAATGAGCTGGACTCCGGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAGCAATACCGCCATATTCAAGCTCCAGGTTGGACATTGGGGTGGACATGGGCAAAGAAAGAAGTAATTTGGAGTATGATGGGAAGCCAAACAACAGAACAAGGAGACTGTTCAAAATTCAAAGGAAGCACTCCACATTGCTGCAAGAAAGATCCAACCGTTGTGGATTTATTGCCAGGAACTCCTTACAATCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTGATGAACTCCTGGGCCCAAGACCCAGCCAATGCAGCAAGTTCATTTCAAGTCAGTGTTGGTTCTGCAGGAACAACTAACAAAACTGTCAAACTCCCCAAAAACTTCACTCTTAGAGCTCCAGGACCTGGATACACTTGTGGTCCAGCAAAGATTGTGAAGCCAACCAGATTTATATCTGGAGATAAAAGAAGAATGACTCAAGCTTTGATGACTTGGAATGTTACATGCACCTATTCTCAATTCCTTGCTCAGAAGACACCCACTTGTTGTGTTTCCCTCTCTTCCTTCTACAATGATACCATAGTCAACTGCCCAACCTGCACTTGTGGATGTAAAAACAACACGGCGAGTCCTGGGAGCTGTGTGGATTCAGATTCTCCACATTTAGCTTCAGTTGTATCAACTCCTGATAAATCGGGCATCAATGAACCCCTGGTTCAGTGTACTAGCCACATGTGTCCCATTCGAGTCCATTGGCATGTGAAGCTGAATTACAAGGATTACTGGAGGGTGAAGGTCACAATCACCAATTTCAATTACAGAATGAACTACACACTCTGGAATCTCGTGGTGCAGCATCCCAATTTTGATAATATAACTAAATTATTCAGCTTTAACTACAAGTCCTTGAGCCCATATGGTGACCTGAATGATACTGCCATGTTATGGGGAGTTAAGTTCTACAATGATCTGCTCAATCAAGCTGGCCCTCTTGGTAATGTGCAGTCTGAGCTCCTATTCCAGAAAGACCAGAACACTTTCACTTTCGACAAGGGTTGGGCTTTTCCAAGAAGAGTTTATTTCAATGGTGATAACTGTGTGATGCCACCTCCAGATGCCTATCCCTATTTGCCAAATGCCAGTTCCAGACCAGCTATATCTCTACTTGCCACAATCTTAATATCTTTGGCATTGCTGTTGAATTTTGCACTATAA 1368 44.37 MSSRRSASTGSVAELTAFSVSVLFLLSTFSFTSTEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKFKGSTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWAQDPANAASSFQVSVGSAGTTNKTVKLPKNFTLRAPGPGYTCGPAKIVKPTRFISGDKRRMTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCKNNTASPGSCVDSDSPHLASVVSTPDKSGINEPLVQCTSHMCPIRVHWHVKLNYKDYWRVKVTITNFNYRMNYTLWNLVVQHPNFDNITKLFSFNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPRRVYFNGDNCVMPPPDAYPYLPNASSRPAISLLATILISLALLLNFAL 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2448414 2451173 + Hsped.09g02850.1 Hepe09g0285 578969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0285 455 PANTHER PROTEIN COBRA 24 446 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Hepe09g0285 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe09g0285 455 PIRSF COBRA 9 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0922 Hepe-Chr2:11097950 Hepe09g0285 Hepe-Chr9:2448414 1.38e-264 dispersed
Hepe07g1196 Hepe-Chr7:28357473 Hepe09g0285 Hepe-Chr9:2448414 1.10e-28 dispersed
Hepe09g0285 Hepe-Chr9:2448414 Hepe09g0286 Hepe-Chr9:2451841 3.27e-233 tandem
Hepe02g0448 Hepe-Chr2:4301509 Hepe09g0285 Hepe-Chr9:2448414 5.73e-140 transposed
Hepe07g0518 Hepe-Chr7:5477028 Hepe09g0285 Hepe-Chr9:2448414 1.88e-172 transposed
Hepe05g1403 Hepe-Chr5:62902835 Hepe09g0285 Hepe-Chr9:2448414 1.92e-39 transposed
Hepe02g0921 Hepe-Chr2:11095838 Hepe09g0285 Hepe-Chr9:2448414 6.09e-238 wgd
Hepe07g2448 Hepe-Chr7:68827158 Hepe09g0285 Hepe-Chr9:2448414 2.21e-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0285 - - - 0.0