Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0286 ATGGGCCAAGAGAAAATTTCCGAAGAATCTGAGAATTACATAGTGCAGTTCAGTTGGAGAACGCTTGATTCTGAAGCAGTTGAATCAGCTCTTGGTTCTGCACATCTGCCTGCCTCTGGTGTGAGAACACTGACAGTTGAAAACTGGTTGAAGCTTTTGATCCCTGCAAAACTTCGAGCCATGGAAGTTAATACCTACATTGATCCATTGCACAGAATTCTCTTTCAAAGGGAATGCTACTCGGGTCGACAGCAAAGAATTGTACTCTTAGCACTGCTGATCTTTACGGCTTTCTATTCAACTGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTCTCTTGGACGGCAGATGGATATGTTGCTGTAGTGGCAATGAACAATTTTCAGATGTACCGCCATATCAATTCACCAGGATGGACTCTAGGCTGGTCATGGGCCAAGAAAGAAGTCATATGGTCTATGGTAGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAACGTCCCTCACTGTTGCAAGAAAAGCCCAATAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAACCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTGTTGCCATCTTGGGGACAGGATCCAGCAGGTTCGGTTTCCGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACTACAAACAAAACTGTTAAGTTGCCGAAGAACTTCACTCTGCTCGGTCCAGGACCAGGCTACACATGTGGACCTGCAAAGATTGTGCCTTCTACAGTCTTCCTCACTCCTGATCGCCGGCGGAAAACTCAAGCACTAATGACATGGAATGTGACCTGCACTTACTCGCAATTTCTGGCCTCTAAAAACCCAACTTGCTGCGTATCACTCTCAACTTTCTACAATGATACGATCACGTCTTGCCCAACCTGTGCGTGTGGCTGCCAGAACAAACATAATTGTATGAAGAGTGGCTCAAAGCTATTGCACAAGGATGGAATAAATACTCCTAAAAAGGATAATGCACCTTTACTACAATGCACCCATCACATGTGTCCTATTCGAGTACACTGGCACGTAAAGATTAATTACAAAGATTACTGGCGTGTGAAGGTTGCGGTAACTAACTTCAACTATAGGATGAATTATACGCTGTGGACGCTGGCAGTGCAGCATCCAAATCTGAACAATGTAACTCAAGTCTTCAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAATGATACGGGCATGTTCTATGGCATGAAATTCTACAACGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTGCAATCTGAAGTACTAATGAAGAAGGACCAGGATACTTTTACCTTCAAGCAGGGCTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCATTTCTACCAAACTCTGCTCCAAGAGGCTCCAGTGCAGTTACCAAATTGACCACCTCCTTGCTTTTGATAATCTGGTTTTTGTGGTGA 1551 44.55 MGQEKISEESENYIVQFSWRTLDSEAVESALGSAHLPASGVRTLTVENWLKLLIPAKLRAMEVNTYIDPLHRILFQRECYSGRQQRIVLLALLIFTAFYSTGAYDPLDPNGNITIKWDIVSWTADGYVAVVAMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKSPIVVDLLPGVPYNQQFSNCCKGGVLPSWGQDPAGSVSAFQVSVGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCMKSGSKLLHKDGINTPKKDNAPLLQCTHHMCPIRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDQDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPRGSSAVTKLTTSLLLIIWFLW 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2451841 2455032 - Hsped.09g02860.1 Hepe09g0286 578970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0286 516 PIRSF COBRA 77 516 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe09g0286 516 Pfam COBRA-like protein 127 290 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe09g0286 516 PANTHER PROTEIN COBRA 91 510 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0921 Hepe-Chr2:11095838 Hepe09g0286 Hepe-Chr9:2451841 4.96e-280 dispersed
Hepe07g0518 Hepe-Chr7:5477028 Hepe09g0286 Hepe-Chr9:2451841 5.61e-164 dispersed
Hepe07g2448 Hepe-Chr7:68827158 Hepe09g0286 Hepe-Chr9:2451841 3.82e-206 dispersed
Hepe09g0285 Hepe-Chr9:2448414 Hepe09g0286 Hepe-Chr9:2451841 3.27e-233 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0286 - - - 0.0