Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0293 ATGCAGGACATCCACTCGATCGCCGGAGGAAGTCGTTTGTTCGGCGGTGGAGGCGGCGGCGACCGTCGGATGAGGCCGCACCTCCACCACCACCAGAATCACCAGGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACGAAGTTCTGTTATTACAATAACTACAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCCGTCGGAGGCGGCTGCCGTAAAACCAAACGCTCCTCCTCCTCCTCCTCCAAGTCCAAATCCACCTCCGACGCGGCGGCGTCACCGACTCCAACTCCAACTCCAACTCCAACTCCAACTCCTCCGCCGCCTCCACTTCGCGAACGCAAATCCACCTCTCATTCCAGCAGCGAGAGCTCCAGCCTCACCGCCACAACCACCACAGCGGCAGCGGCCACGGAGGCCGTCTCCGCTCCGTCCTCCAATTCGGCATCCACTCTATTGAACTTACAGGATTCTAAATTGTTCCCTACTCCAAGCACAAACCCTAATTTCGAGACGACGACGGCGGCGGAGTGCGGGATTTTCTCGGAAATCGGAAGCTTCACGAGCTTGATCACGTCGTGTAACGAGACATTGACGTTCGGATTCGGAAACATGGCGGAGGTGACGACGCCGTTCGCGATGAATCATCATCAGTTTCAGAATCAACCGGCGAATCAATGGGCGGCGGCGCCACAGAGAATGATGAACGTTAACGACGAAGTGAAGATGCAGGAGATCACAGGGGGGTACGTGGATCCATCAGGGCCGCTACCGCTACAGAATAGCAGATCAAGCAACATTGGATTTGGAGCGTTGGATTGGCAATCGAACGGTGATCAACAACAGGTTCTGTTTGATCTTCCGAACGCCGTTGATCATGCATACTGGAGTCAAAATCAATGGAGCGATCAAGATCATGCTAATCTCTACCTTCCGTAA 984 55.08 MQDIHSIAGGSRLFGGGGGGDRRMRPHLHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSSSSSSKSKSTSDAAASPTPTPTPTPTPTPPPPPLRERKSTSHSSSESSSLTATTTTAAAATEAVSAPSSNSASTLLNLQDSKLFPTPSTNPNFETTTAAECGIFSEIGSFTSLITSCNETLTFGFGNMAEVTTPFAMNHHQFQNQPANQWAAAPQRMMNVNDEVKMQEITGGYVDPSGPLPLQNSRSSNIGFGALDWQSNGDQQQVLFDLPNAVDHAYWSQNQWSDQDHANLYLP 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2523595 2525108 - Hsped.09g02930.1 Hepe09g0293 578977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0293 327 MobiDBLite consensus disorder prediction 135 162 - -
Hepe09g0293 327 MobiDBLite consensus disorder prediction 1 26 - -
Hepe09g0293 327 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 218 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0293 327 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe09g0293 327 MobiDBLite consensus disorder prediction 88 109 - -
Hepe09g0293 327 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe09g0293 327 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe09g0293 327 MobiDBLite consensus disorder prediction 110 128 - -
Hepe09g0293 327 MobiDBLite consensus disorder prediction 81 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0855 Hepe-Chr8:7793042 Hepe09g0293 Hepe-Chr9:2523595 8.32e-33 dispersed
Hepe09g0293 Hepe-Chr9:2523595 Hepe10g1082 Hepe-Chr10:43073319 1.30e-31 dispersed
Hepe07g2439 Hepe-Chr7:68755397 Hepe09g0293 Hepe-Chr9:2523595 4.51e-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56336 PF02701 zf-Dof 4.40E-33 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0293 - - - 0.0