Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0316 ATGGAGCCGATGGACATAATTGGAAAATCTAAAGAGGACGCCTCGCTTCCAAAGGCAACTATGACTAAAATTATTAAAGAGATGTTGCCCCCTGATGTACGCGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCAGAGTCTAACGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAGTACATCGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGAAACTTCTCCAGCAAGACTCCTTGAAAGGTGGAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTCGCAGAGGCACGTGCAAGAATGAATGGTGGTAACACTGCTCCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAA 483 43.89 MEPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKLLQQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGNTAPKQPEPEQSLES 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2745568 2748419 + Hsped.09g03160.1 Hepe09g0316 579000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0316 160 PANTHER PROTEIN DR1 HOMOLOG 1 158 IPR044255 -
Hepe09g0316 160 MobiDBLite consensus disorder prediction 138 160 - -
Hepe09g0316 160 Gene3D Histone, subunit A 5 148 IPR009072 GO:0046982(InterPro)
Hepe09g0316 160 FunFam Negative cofactor 2 beta 6 147 - -
Hepe09g0316 160 SUPERFAMILY Histone-fold 12 145 IPR009072 GO:0046982(InterPro)
Hepe09g0316 160 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56339 PF00808 CBFD_NFYB_HMF 2.90E-22 CL0012 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0316 K21751 - csv:101214627 295.434