Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0348 | ATGGCGGATTTCACTTCTGAATTGCAAACCTTCAAGCCTTCTTTCTCCTTCCCGGATTTAATGATGGATCCTAATTTGGAATTAATGGGTCCTAATTTAGATAACCCAGCTGGGAATTTCACTAATTTTTTGCCATTTTCTTCCAATGAGATATTCTTCCCTCCTCATCAAAACCCACAAGAATTTCCACAAAATTTGGGAGAAATTACTACGACCTTCCCAATTTCTCGTGAATTCCATCAGATCAAGAGAAAATCCATGGATGTTTCAGAAAGCTCCTCTGGAATTTCAACTCCACAAGTTTCTGAAACTGCCTTCAACAACCCCAAAAATAGCTCTGGAAAAGGGAAGAGATTGAAAAGCATAGAGAAAGAAGAAGAGAAATCAACCAGAGAAGTGGTTCATGTCAGAGCTAGAAGAGGCCAAGCTACTGATAGCCATAGTTTAGCTGAAAGGGTGAGAAGAGGAAAAATCAATGAAAGACTAAGATGCTTGAAAGACATTGTCCCAGGATGCTACAAGACCATGGGCATGGCAGTCATGTTGGATGAGATAATTAATTATGTCCAATCTTTACAGAATCAAGTGGAGTTCCTATCCATGAAACTTGCTGCAGCTAGTTCTTTTTATGACTTTAACTCGGAGTCAGATGCGATATCAAAATTACAGAGGGCAAAGGCAAATGAAGCAAAAGAATTGGAGAGATTGATGAGAGAAGGATATGGAGGAGTAGCTTGCTTCCACTCAACTTTGCCTCTTTGA | 762 | 39.63 | MADFTSELQTFKPSFSFPDLMMDPNLELMGPNLDNPAGNFTNFLPFSSNEIFFPPHQNPQEFPQNLGEITTTFPISREFHQIKRKSMDVSESSSGISTPQVSETAFNNPKNSSGKGKRLKSIEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSESDAISKLQRAKANEAKELERLMREGYGGVACFHSTLPL | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3058840 | 3060212 | - | Hsped.09g03480.1 | Hepe09g0348 | 579032 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0348 | 253 | Coils | Coil | 219 | 239 | - | - | |
Hepe09g0348 | 253 | CDD | bHLH_AtBPE_like | 132 | 217 | - | - | |
Hepe09g0348 | 253 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 142 | 192 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g0348 | 253 | Pfam | Helix-loop-helix DNA-binding domain | 146 | 193 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g0348 | 253 | FunFam | transcription factor BEE 3-like | 139 | 210 | - | - | |
Hepe09g0348 | 253 | MobiDBLite | consensus disorder prediction | 116 | 148 | - | - | |
Hepe09g0348 | 253 | MobiDBLite | consensus disorder prediction | 88 | 115 | - | - | |
Hepe09g0348 | 253 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 92 | 228 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Hepe09g0348 | 253 | Gene3D | - | 138 | 210 | IPR036638 | GO:0046983(InterPro) | |
Hepe09g0348 | 253 | SMART | finulus | 148 | 198 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g0348 | 253 | MobiDBLite | consensus disorder prediction | 86 | 148 | - | - | |
Hepe09g0348 | 253 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 140 | 210 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0985 | Hepe-Chr2:12005111 | Hepe09g0348 | Hepe-Chr9:3058840 | 8.31e-10 | dispersed | |
Hepe05g1121 | Hepe-Chr5:55294306 | Hepe09g0348 | Hepe-Chr9:3058840 | 8.11e-32 | dispersed | |
Hepe09g0348 | Hepe-Chr9:3058840 | Hepe09g1288 | Hepe-Chr9:17812091 | 3.97e-48 | dispersed | |
Hepe02g2699 | Hepe-Chr2:74908893 | Hepe09g0348 | Hepe-Chr9:3058840 | 5.15e-49 | wgd | |
Hepe07g2392 | Hepe-Chr7:68266336 | Hepe09g0348 | Hepe-Chr9:3058840 | 3.67e-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56345 | PF00010 | HLH | 4.20E-05 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0348 | - | - | - | 0.0 |