Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0355 ATGGCGACGCCGTTGACAGGTCTACAACACAGGGACGGTGGCGGAGGAGTTGCCTTTTTGGCTAATTCTGTTAATAAAATGGATTCCGCCTCCTCGAATGATTGTTTGAGGAGTTCTGAGCCACAGTCTCCGATTCTTATTTTTCTCTTCTTCCATAAAGCAATTCGCAATGAGCTCGATACGCTTCACCGTCTGGCTATGGCGTTTGCTACCGGCCAGAGACCAGATATTCGGCCGCTGTTTGAACGATACCATTTCTTGAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATTTTTCCTGCACTTGACATTCGTGTGAAGAATGTGGCACAGACATATTCCCTTGAACACAAGGGTGAAAGCAATCTGTTTGATCATCTTTTTGAGCTTCTTAATTCTAATACACAAAATGACGAAAGCTTCCCAAGGGAGTTAGCGTCCTGCACTGGTGCCCTAAAGACATCTGTGAGCCAGCACATGGCTAAGGAAGAAGAGCAGGTATTTCCCCTGCTTATAGAAAAGTTCTCCTTGGAAGAGCAGGCATCCCTCGTTTGGCAGTTCTTCTGCAGTATTCCTGTGTACATGATGGCTCAATTCCTCCCTTGGCTTTCATCATCTGTTTCACCTGATGAATTTCAGGATCTACAGAAATGTTTAAGCAAGGTAGTCCCCGAGGAAAAGCTTCTCCAACAGGTTATATTTACTTGGATGGAAGCGAGAAGTTGTGACAATGTAACAACAAGTTGCTTTGATGATTCTCCAGTAAGATATCATACAGATCCTACTACTGATACATCAAATCATCAAACAGAAAATGTAAATTGTGCTTGTGAATTGACCAGCCATGGGAAAAGAAAATATTTGGAGTCAAGTTCTGATACATCGGATTATGTGGCCACTCATCCGATCAATGAAATACTGTTCTGGCATAATGCCATCAAACGAGAGTTGAATGACATAGCTGAGGAGGCCAGGAAGATACAACTTTCTGGGAACTTTAGTAATCTATTAACTTTTAACGAGAGGTTGCAATTCATTGCTGAAGTTTGCATTTTTCATAGTATTGCCGAGGACAAGGTAATCTTTCCTGCAGTAGATGGAGAGTTTTCTTTTCTCCAGGAACATGCTGAAGAAGAAAGTCAATTCAATGAGTTTAGGTGCCTGATTGAAAATATTCAAAGTGCAGGGGCTAGTTCTACTTCAAGAGCTGAATTTCACGTGAAGTTGTGTTCTCATGCTGATCAGATAATGGATACCATTAAGAGGCACTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTAGAAAGCACTTCAGTTTCAAGAGACAACGGGAACTATTGTATCAAAGCTTGTGCATGATGCCTTTAAAATTGATTGAACGTGTCCTGCCATGGCTGGTAGGATCATCGAAAGAAGATGAAGCTAGAGATTTTCTCAAGAACATGCAGTTGGCAGCTCCAGCTAAAGATACTGCTCTAGTGACTCTCTTTTCTGGTTGGGCTTGCAAGGCTCGTAATAATGGTTTGTGCTTGTCTTCAAGAGCAGATGGCTGTTGTGTAGTCGAAAGGTTAACTGACATTGAAGAAGACATCGTTCAATCATCTTGTTCATGTGCCCCTGCATTGATTGCAAGGGAAGGTCCAAAATCAGATCCCGAAACTAAGGCGGCTAATGTTAAGAGGCCAGCCATACGAAATGTTCCAATGCCATGCAGAAGTTGTGATGGCCGTGTTGCTTCAGAGACTGTAGATGTCCAGCAACAATGTTGTAGTGATCAGTCCTGCCGTGTTCCAGCTTTAGGAGTAAACAGCAAGAATCTGGGGTTGAGTTCTATTTTCACATCCAAGTCTATGCGATCCTTATCTCCTAGCTCTTGTGCACCATCGCTCAATTCCAGCCTTTTTTCATGGGAAACAGATAGTGTCTCTTCTGATGTTGGGTCTGCAGGACGTCCCATTGATACTATTTTTAAATTTCACAAAGCTATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAACTTAGTGATTGTGATGGGACATTTCTCAGGCAATTTATTGGAAGATTTCGCCTTCTATGGGGGTTATATAGAGCTCATAGTAATGCTGAAGATGATATTGTATTTCCTGCATTGGAATCCAAAGAGACATTGCATAATGTAAGTCACTCGTATACACTAGACCATAAGCAGGAGGAAAAATTATTTGAGGACATTTCATGTGTTCTCTCTGAGATTTCACTCCTCCACGAAAGTCTGCATGAGGTTCCGTTGGATGAGAGTTTTTCTAGAAGTGATGTTGGCTTTGTTAATGTTGTGGGGAAGGATTGTAATAGAAAGTACCACGAGCTTGCTACAAAGCTTCAAGGAATGTGCAAATCTGTAAGAGTTACCCTGGATCAGCATATTTTTAGGGAAGAACTTGAACTTTGGCCACTGTTTGGAAAACACTTCTCTGTGGAGGAGCAAGACAAATTAGTTGGCCGGATTATTGGGACCACAGGTGCTGAAGTTCTCCAGTCAATGTTGCCATGGGTAACATCTGCACTTACTCAGGACGAACAGAATACTATGATGGATACGTGGAAGCAGGCCACGAAAAACACCATGTTCAATGAATGGCTCAATGAATGTTGGAGAGGGACTGCTTCATCTACTTTAAATGGTGAAACGTTGGAAGCCAGTGTAGCTGAAAAAGATTCTGGGCTTATTGAGAGCTTGGATCAGAATGATCAAATGTTTAAGCCTGGTTGGAAAGATATTTTTCGCATGAACCAAAATGAACTTGAATCAGAAATCAGAAAGGTTTATCAGGACTCAACTCTTGATCCGAGGAGAAAAGCATATCTCGTGCAGAATCTTATGACCAGTCGCTGGATTGCTGCACAACAGAAATTACCTCAAGCAAATATAGAAGATAATTCCAATGGTGAAGATGTAGCAGGACGAACATCATCTTTTCGCTGTGCCGAGAAAAAAGAGTTTGGGTGTGAGCATTACAAAAGAAACTGCAAGCTTCTTGCTGCTTGCTGTGGGAAGTTATTTACTTGTCGATTCTGTCATGACAATGTCAGCGATCACTCAATGGACAGGAAAGCAACTTCAGAGATGATGTGTATGAACTGCTTAACAGTTCAACCAGTTGGGCCGATATGCACAACACCTTCTTGCAATGGATTGTCAATGGCAAAATACTACTGCAATATTTGCAAATTTTTTGATGATGAAAGGACTGTGTATCATTGCCCATTTTGCAACTTATGCCGTGTTGGGAAGGGTCTTGGAATTGATTTTTTCCATTGCATGATTTGCAATTGTTGCCTTGGGATAAAGCTGGAGAGCCATAAGTGCTTGGAGAAAAGTTTAGAAACGAACTGTCCCATCTGCTGTGATTTCTTGTTTACATCCAGTGCAACAGTCAGACCGCTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCATACACTTGCAGCCATTATACCTGTCCCATTTGCAGCAAGTCCTTGGGAGATATGGCGGTTTATTTCGGCATGCTTGACGCCTTGTTGGCTGCTGAGGAGCTGCCAGAAGAGTACAGGGATCGTTGCCAGGACATATTGTGCAATGACTGTGAGCGGAAAGGCGCATCGCGGTTCCATTGGCTATATCATAAATGTGGGCTTTGTGGATCATACAACACCCGGGTAATCAAGAACGATACCGATTGCCCGTCTTCGAATCAATGA 3753 42.42 MATPLTGLQHRDGGGGVAFLANSVNKMDSASSNDCLRSSEPQSPILIFLFFHKAIRNELDTLHRLAMAFATGQRPDIRPLFERYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSNTQNDESFPRELASCTGALKTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFFCSIPVYMMAQFLPWLSSSVSPDEFQDLQKCLSKVVPEEKLLQQVIFTWMEARSCDNVTTSCFDDSPVRYHTDPTTDTSNHQTENVNCACELTSHGKRKYLESSSDTSDYVATHPINEILFWHNAIKRELNDIAEEARKIQLSGNFSNLLTFNERLQFIAEVCIFHSIAEDKVIFPAVDGEFSFLQEHAEEESQFNEFRCLIENIQSAGASSTSRAEFHVKLCSHADQIMDTIKRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSSKEDEARDFLKNMQLAAPAKDTALVTLFSGWACKARNNGLCLSSRADGCCVVERLTDIEEDIVQSSCSCAPALIAREGPKSDPETKAANVKRPAIRNVPMPCRSCDGRVASETVDVQQQCCSDQSCRVPALGVNSKNLGLSSIFTSKSMRSLSPSSCAPSLNSSLFSWETDSVSSDVGSAGRPIDTIFKFHKAIRKDLEYLDVESGKLSDCDGTFLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCVLSEISLLHESLHEVPLDESFSRSDVGFVNVVGKDCNRKYHELATKLQGMCKSVRVTLDQHIFREELELWPLFGKHFSVEEQDKLVGRIIGTTGAEVLQSMLPWVTSALTQDEQNTMMDTWKQATKNTMFNEWLNECWRGTASSTLNGETLEASVAEKDSGLIESLDQNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPQANIEDNSNGEDVAGRTSSFRCAEKKEFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLTVQPVGPICTTPSCNGLSMAKYYCNICKFFDDERTVYHCPFCNLCRVGKGLGIDFFHCMICNCCLGIKLESHKCLEKSLETNCPICCDFLFTSSATVRPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCNDCERKGASRFHWLYHKCGLCGSYNTRVIKNDTDCPSSNQ 1250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3107414 3120730 - Hsped.09g03550.1 Hepe09g0355 579039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0355 1250 CDD RING-H2_Pirh2-like 1132 1175 - -
Hepe09g0355 1250 ProSiteProfiles Zinc finger CHY-type profile. 997 1066 IPR008913 GO:0008270(InterPro)
Hepe09g0355 1250 Pfam Hemerythrin HHE cation binding domain 48 175 IPR012312 -
Hepe09g0355 1250 Pfam Hemerythrin HHE cation binding domain 657 819 IPR012312 -
Hepe09g0355 1250 Pfam Hemerythrin HHE cation binding domain 306 439 IPR012312 -
Hepe09g0355 1250 Pfam CHY zinc finger 1004 1072 IPR008913 GO:0008270(InterPro)
Hepe09g0355 1250 SUPERFAMILY Zinc hairpin stack 1070 1126 IPR037275 -
Hepe09g0355 1250 SUPERFAMILY CHY zinc finger-like 998 1060 IPR037274 GO:0008270(InterPro)
Hepe09g0355 1250 Gene3D nmb1532 protein domain like 652 884 - -
Hepe09g0355 1250 Pfam Ring finger domain 1132 1174 IPR001841 -
Hepe09g0355 1250 CDD Hr-like 47 173 - -
Hepe09g0355 1250 Pfam Zinc-ribbon 1180 1237 IPR039512 -
Hepe09g0355 1250 FunFam Zinc finger protein-related isoform 1 1128 1177 - -
Hepe09g0355 1250 SMART ring_2 1133 1174 IPR001841 -
Hepe09g0355 1250 Gene3D - 1204 1244 - -
Hepe09g0355 1250 Gene3D nmb1532 protein domain like 42 192 - -
Hepe09g0355 1250 Gene3D nmb1532 protein domain like 308 455 - -
Hepe09g0355 1250 ProSiteProfiles Zinc finger CTCHY-type profile. 1069 1132 IPR017921 -
Hepe09g0355 1250 CDD Hr-like 659 819 - -
Hepe09g0355 1250 CDD Hr-like 309 437 - -
Hepe09g0355 1250 ProSiteProfiles Zinc finger RING-type profile. 1133 1175 IPR001841 -
Hepe09g0355 1250 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 692 1239 - -
Hepe09g0355 1250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1126 1177 IPR013083 -
Hepe09g0355 1250 SUPERFAMILY RING/U-box 1132 1178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0684 Hepe-Chr3:16380608 Hepe09g0355 Hepe-Chr9:3107414 1.23e-21 dispersed
Hepe09g0145 Hepe-Chr9:1163876 Hepe09g0355 Hepe-Chr9:3107414 7.69e-264 transposed
Hepe01g1172 Hepe-Chr1:76874994 Hepe09g0355 Hepe-Chr9:3107414 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0355 K16276 - csv:101215023 2394.0