Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0355 | ATGGCGACGCCGTTGACAGGTCTACAACACAGGGACGGTGGCGGAGGAGTTGCCTTTTTGGCTAATTCTGTTAATAAAATGGATTCCGCCTCCTCGAATGATTGTTTGAGGAGTTCTGAGCCACAGTCTCCGATTCTTATTTTTCTCTTCTTCCATAAAGCAATTCGCAATGAGCTCGATACGCTTCACCGTCTGGCTATGGCGTTTGCTACCGGCCAGAGACCAGATATTCGGCCGCTGTTTGAACGATACCATTTCTTGAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATTTTTCCTGCACTTGACATTCGTGTGAAGAATGTGGCACAGACATATTCCCTTGAACACAAGGGTGAAAGCAATCTGTTTGATCATCTTTTTGAGCTTCTTAATTCTAATACACAAAATGACGAAAGCTTCCCAAGGGAGTTAGCGTCCTGCACTGGTGCCCTAAAGACATCTGTGAGCCAGCACATGGCTAAGGAAGAAGAGCAGGTATTTCCCCTGCTTATAGAAAAGTTCTCCTTGGAAGAGCAGGCATCCCTCGTTTGGCAGTTCTTCTGCAGTATTCCTGTGTACATGATGGCTCAATTCCTCCCTTGGCTTTCATCATCTGTTTCACCTGATGAATTTCAGGATCTACAGAAATGTTTAAGCAAGGTAGTCCCCGAGGAAAAGCTTCTCCAACAGGTTATATTTACTTGGATGGAAGCGAGAAGTTGTGACAATGTAACAACAAGTTGCTTTGATGATTCTCCAGTAAGATATCATACAGATCCTACTACTGATACATCAAATCATCAAACAGAAAATGTAAATTGTGCTTGTGAATTGACCAGCCATGGGAAAAGAAAATATTTGGAGTCAAGTTCTGATACATCGGATTATGTGGCCACTCATCCGATCAATGAAATACTGTTCTGGCATAATGCCATCAAACGAGAGTTGAATGACATAGCTGAGGAGGCCAGGAAGATACAACTTTCTGGGAACTTTAGTAATCTATTAACTTTTAACGAGAGGTTGCAATTCATTGCTGAAGTTTGCATTTTTCATAGTATTGCCGAGGACAAGGTAATCTTTCCTGCAGTAGATGGAGAGTTTTCTTTTCTCCAGGAACATGCTGAAGAAGAAAGTCAATTCAATGAGTTTAGGTGCCTGATTGAAAATATTCAAAGTGCAGGGGCTAGTTCTACTTCAAGAGCTGAATTTCACGTGAAGTTGTGTTCTCATGCTGATCAGATAATGGATACCATTAAGAGGCACTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTAGAAAGCACTTCAGTTTCAAGAGACAACGGGAACTATTGTATCAAAGCTTGTGCATGATGCCTTTAAAATTGATTGAACGTGTCCTGCCATGGCTGGTAGGATCATCGAAAGAAGATGAAGCTAGAGATTTTCTCAAGAACATGCAGTTGGCAGCTCCAGCTAAAGATACTGCTCTAGTGACTCTCTTTTCTGGTTGGGCTTGCAAGGCTCGTAATAATGGTTTGTGCTTGTCTTCAAGAGCAGATGGCTGTTGTGTAGTCGAAAGGTTAACTGACATTGAAGAAGACATCGTTCAATCATCTTGTTCATGTGCCCCTGCATTGATTGCAAGGGAAGGTCCAAAATCAGATCCCGAAACTAAGGCGGCTAATGTTAAGAGGCCAGCCATACGAAATGTTCCAATGCCATGCAGAAGTTGTGATGGCCGTGTTGCTTCAGAGACTGTAGATGTCCAGCAACAATGTTGTAGTGATCAGTCCTGCCGTGTTCCAGCTTTAGGAGTAAACAGCAAGAATCTGGGGTTGAGTTCTATTTTCACATCCAAGTCTATGCGATCCTTATCTCCTAGCTCTTGTGCACCATCGCTCAATTCCAGCCTTTTTTCATGGGAAACAGATAGTGTCTCTTCTGATGTTGGGTCTGCAGGACGTCCCATTGATACTATTTTTAAATTTCACAAAGCTATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAACTTAGTGATTGTGATGGGACATTTCTCAGGCAATTTATTGGAAGATTTCGCCTTCTATGGGGGTTATATAGAGCTCATAGTAATGCTGAAGATGATATTGTATTTCCTGCATTGGAATCCAAAGAGACATTGCATAATGTAAGTCACTCGTATACACTAGACCATAAGCAGGAGGAAAAATTATTTGAGGACATTTCATGTGTTCTCTCTGAGATTTCACTCCTCCACGAAAGTCTGCATGAGGTTCCGTTGGATGAGAGTTTTTCTAGAAGTGATGTTGGCTTTGTTAATGTTGTGGGGAAGGATTGTAATAGAAAGTACCACGAGCTTGCTACAAAGCTTCAAGGAATGTGCAAATCTGTAAGAGTTACCCTGGATCAGCATATTTTTAGGGAAGAACTTGAACTTTGGCCACTGTTTGGAAAACACTTCTCTGTGGAGGAGCAAGACAAATTAGTTGGCCGGATTATTGGGACCACAGGTGCTGAAGTTCTCCAGTCAATGTTGCCATGGGTAACATCTGCACTTACTCAGGACGAACAGAATACTATGATGGATACGTGGAAGCAGGCCACGAAAAACACCATGTTCAATGAATGGCTCAATGAATGTTGGAGAGGGACTGCTTCATCTACTTTAAATGGTGAAACGTTGGAAGCCAGTGTAGCTGAAAAAGATTCTGGGCTTATTGAGAGCTTGGATCAGAATGATCAAATGTTTAAGCCTGGTTGGAAAGATATTTTTCGCATGAACCAAAATGAACTTGAATCAGAAATCAGAAAGGTTTATCAGGACTCAACTCTTGATCCGAGGAGAAAAGCATATCTCGTGCAGAATCTTATGACCAGTCGCTGGATTGCTGCACAACAGAAATTACCTCAAGCAAATATAGAAGATAATTCCAATGGTGAAGATGTAGCAGGACGAACATCATCTTTTCGCTGTGCCGAGAAAAAAGAGTTTGGGTGTGAGCATTACAAAAGAAACTGCAAGCTTCTTGCTGCTTGCTGTGGGAAGTTATTTACTTGTCGATTCTGTCATGACAATGTCAGCGATCACTCAATGGACAGGAAAGCAACTTCAGAGATGATGTGTATGAACTGCTTAACAGTTCAACCAGTTGGGCCGATATGCACAACACCTTCTTGCAATGGATTGTCAATGGCAAAATACTACTGCAATATTTGCAAATTTTTTGATGATGAAAGGACTGTGTATCATTGCCCATTTTGCAACTTATGCCGTGTTGGGAAGGGTCTTGGAATTGATTTTTTCCATTGCATGATTTGCAATTGTTGCCTTGGGATAAAGCTGGAGAGCCATAAGTGCTTGGAGAAAAGTTTAGAAACGAACTGTCCCATCTGCTGTGATTTCTTGTTTACATCCAGTGCAACAGTCAGACCGCTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCATACACTTGCAGCCATTATACCTGTCCCATTTGCAGCAAGTCCTTGGGAGATATGGCGGTTTATTTCGGCATGCTTGACGCCTTGTTGGCTGCTGAGGAGCTGCCAGAAGAGTACAGGGATCGTTGCCAGGACATATTGTGCAATGACTGTGAGCGGAAAGGCGCATCGCGGTTCCATTGGCTATATCATAAATGTGGGCTTTGTGGATCATACAACACCCGGGTAATCAAGAACGATACCGATTGCCCGTCTTCGAATCAATGA | 3753 | 42.42 | MATPLTGLQHRDGGGGVAFLANSVNKMDSASSNDCLRSSEPQSPILIFLFFHKAIRNELDTLHRLAMAFATGQRPDIRPLFERYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSNTQNDESFPRELASCTGALKTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFFCSIPVYMMAQFLPWLSSSVSPDEFQDLQKCLSKVVPEEKLLQQVIFTWMEARSCDNVTTSCFDDSPVRYHTDPTTDTSNHQTENVNCACELTSHGKRKYLESSSDTSDYVATHPINEILFWHNAIKRELNDIAEEARKIQLSGNFSNLLTFNERLQFIAEVCIFHSIAEDKVIFPAVDGEFSFLQEHAEEESQFNEFRCLIENIQSAGASSTSRAEFHVKLCSHADQIMDTIKRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSSKEDEARDFLKNMQLAAPAKDTALVTLFSGWACKARNNGLCLSSRADGCCVVERLTDIEEDIVQSSCSCAPALIAREGPKSDPETKAANVKRPAIRNVPMPCRSCDGRVASETVDVQQQCCSDQSCRVPALGVNSKNLGLSSIFTSKSMRSLSPSSCAPSLNSSLFSWETDSVSSDVGSAGRPIDTIFKFHKAIRKDLEYLDVESGKLSDCDGTFLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCVLSEISLLHESLHEVPLDESFSRSDVGFVNVVGKDCNRKYHELATKLQGMCKSVRVTLDQHIFREELELWPLFGKHFSVEEQDKLVGRIIGTTGAEVLQSMLPWVTSALTQDEQNTMMDTWKQATKNTMFNEWLNECWRGTASSTLNGETLEASVAEKDSGLIESLDQNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPQANIEDNSNGEDVAGRTSSFRCAEKKEFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLTVQPVGPICTTPSCNGLSMAKYYCNICKFFDDERTVYHCPFCNLCRVGKGLGIDFFHCMICNCCLGIKLESHKCLEKSLETNCPICCDFLFTSSATVRPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCNDCERKGASRFHWLYHKCGLCGSYNTRVIKNDTDCPSSNQ | 1250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3107414 | 3120730 | - | Hsped.09g03550.1 | Hepe09g0355 | 579039 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0355 | 1250 | CDD | RING-H2_Pirh2-like | 1132 | 1175 | - | - | |
Hepe09g0355 | 1250 | ProSiteProfiles | Zinc finger CHY-type profile. | 997 | 1066 | IPR008913 | GO:0008270(InterPro) | |
Hepe09g0355 | 1250 | Pfam | Hemerythrin HHE cation binding domain | 48 | 175 | IPR012312 | - | |
Hepe09g0355 | 1250 | Pfam | Hemerythrin HHE cation binding domain | 657 | 819 | IPR012312 | - | |
Hepe09g0355 | 1250 | Pfam | Hemerythrin HHE cation binding domain | 306 | 439 | IPR012312 | - | |
Hepe09g0355 | 1250 | Pfam | CHY zinc finger | 1004 | 1072 | IPR008913 | GO:0008270(InterPro) | |
Hepe09g0355 | 1250 | SUPERFAMILY | Zinc hairpin stack | 1070 | 1126 | IPR037275 | - | |
Hepe09g0355 | 1250 | SUPERFAMILY | CHY zinc finger-like | 998 | 1060 | IPR037274 | GO:0008270(InterPro) | |
Hepe09g0355 | 1250 | Gene3D | nmb1532 protein domain like | 652 | 884 | - | - | |
Hepe09g0355 | 1250 | Pfam | Ring finger domain | 1132 | 1174 | IPR001841 | - | |
Hepe09g0355 | 1250 | CDD | Hr-like | 47 | 173 | - | - | |
Hepe09g0355 | 1250 | Pfam | Zinc-ribbon | 1180 | 1237 | IPR039512 | - | |
Hepe09g0355 | 1250 | FunFam | Zinc finger protein-related isoform 1 | 1128 | 1177 | - | - | |
Hepe09g0355 | 1250 | SMART | ring_2 | 1133 | 1174 | IPR001841 | - | |
Hepe09g0355 | 1250 | Gene3D | - | 1204 | 1244 | - | - | |
Hepe09g0355 | 1250 | Gene3D | nmb1532 protein domain like | 42 | 192 | - | - | |
Hepe09g0355 | 1250 | Gene3D | nmb1532 protein domain like | 308 | 455 | - | - | |
Hepe09g0355 | 1250 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1069 | 1132 | IPR017921 | - | |
Hepe09g0355 | 1250 | CDD | Hr-like | 659 | 819 | - | - | |
Hepe09g0355 | 1250 | CDD | Hr-like | 309 | 437 | - | - | |
Hepe09g0355 | 1250 | ProSiteProfiles | Zinc finger RING-type profile. | 1133 | 1175 | IPR001841 | - | |
Hepe09g0355 | 1250 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 692 | 1239 | - | - | |
Hepe09g0355 | 1250 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1126 | 1177 | IPR013083 | - | |
Hepe09g0355 | 1250 | SUPERFAMILY | RING/U-box | 1132 | 1178 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0684 | Hepe-Chr3:16380608 | Hepe09g0355 | Hepe-Chr9:3107414 | 1.23e-21 | dispersed | |
Hepe09g0145 | Hepe-Chr9:1163876 | Hepe09g0355 | Hepe-Chr9:3107414 | 7.69e-264 | transposed | |
Hepe01g1172 | Hepe-Chr1:76874994 | Hepe09g0355 | Hepe-Chr9:3107414 | 0.0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0355 | K16276 | - | csv:101215023 | 2394.0 |