Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0370 ATGGCTGAGCTCGATCCATTGAAGAAAGTGGCCGATAGATATTTAAAGCGTGAGGTTCTCGGGGAGGGTACCTATGGTGTTGTATATAAGGCCATCGATACTCAGACAGGTCAGACGGTTGCAATCAAGAAGATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACAGCTCTTCGTGAAATCAAGCTGCTTAAAGAGCTCAAAGATCCAAATATAATTGAGTTAATTGATGCATTCCCTCATAAAGGAAATTTGCATCTTGTTTTTGAATTTATGGAGACGGACCTCGAAGCTGTTATACGTGATCGAAACATATTTCTTTCCCCAGCTGACATAAAAACATACCTTCAGATGACGTTGAAAGGCCTTGCTGTTTGCCACAAGAAATGGGTTATACATAGGGATATGAAGCCAAATAATTTGTTGATAGGACCAAATGGTCAACTGAAACTTGCAGATTTTGGTTTGGCTCGGATATTTGGGAGTCCAGATCGTAGATTTACTCACCAGGTGTTTGCCCGATGGTACAGAGCACCTGAGCTATTGTTTGGCACTAAGCAATATGGTTCTGCAGTGGATGTTTGGGCAGCAGCTTGTATTTTTGCTGAATTACTACTTCGTCGACCTTTTCTTCAGGAAAATTTTGGAACTTCCTTCTTGAAGCTTTTAATTGGTCCTTTCCTCGACCGGGGTTCAAGTGACATTGATCAACTAGGGAAGATCTTTGCAGCTTTTGGAACTCCTACGCCTTCTCAGTGGCCTGATATGTTATACCTACCTGATTACGTGGAATTCCAATATGTTCCTGCACCTCCTCTACGATCATTGTTTCCTATGGCTAGTGATGATACGCTGGATCTCCTATCGAAGATGTTTGCTTATGATCCGAAATCTAGATTTTCCATCCAGCAAGCATTGGATCATAGGTACTTCACATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCGTGAACCTATGAACACTAGAGTTTCAGACTTAAATTCAAATGAGGGTCCTACTGTCCTCTCGCCTCCAAGAAAGTCAAGAAGAGTAATGCCAGATCGTGAGGCTTTTGAAGGAAATGCATGTAGAGCTGATAAGCTTGATGACCATGCTAATGAGGTGCGAGAGGTAGCTGCTGGAAATACAAGCAAGAATGAAGCAGTGCCAATGTCGTTGGATTTTTCTATTTTTGGTGGAAAACCTCCAAATAGACCAACAATTAATAGTGCCGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAGCAATAA 1305 41.76 MAELDPLKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKTYLQMTLKGLAVCHKKWVIHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQENFGTSFLKLLIGPFLDRGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRFSIQQALDHRYFTSAPLPTDPSKLPRPTSKREPMNTRVSDLNSNEGPTVLSPPRKSRRVMPDREAFEGNACRADKLDDHANEVREVAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3288488 3294908 - Hsped.09g03700.1 Hepe09g0370 579054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0370 434 SUPERFAMILY Protein kinase-like (PK-like) 9 319 IPR011009 -
Hepe09g0370 434 FunFam Mitogen-activated protein kinase 93 328 - -
Hepe09g0370 434 SMART serkin_6 14 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0370 434 MobiDBLite consensus disorder prediction 332 350 - -
Hepe09g0370 434 ProSiteProfiles Protein kinase domain profile. 14 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0370 434 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Hepe09g0370 434 Pfam Protein kinase domain 16 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0370 434 PANTHER CELL DIVISION PROTEIN KINASE 14 312 IPR050108 GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0045944(PANTHER)|GO:0070985(PANTHER)
Hepe09g0370 434 CDD STKc_CDK7 13 325 IPR037770 GO:0005675(InterPro)|GO:0008353(InterPro)|GO:0070985(InterPro)
Hepe09g0370 434 Gene3D Transferase(Phosphotransferase) domain 1 95 328 - -
Hepe09g0370 434 MobiDBLite consensus disorder prediction 312 359 - -
Hepe09g0370 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0370 434 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524(InterPro)
Hepe09g0370 434 FunFam Cyclin-dependent kinase D-1 5 94 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0370 Hepe-Chr9:3288488 Hepe10g0088 Hepe-Chr10:838454 9.49e-58 dispersed
Hepe09g0370 Hepe-Chr9:3288488 Hepe10g1534 Hepe-Chr10:52091184 3.04e-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73112 PF00069 Pkinase 3.10E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0370 K02202 - csv:101217645 790.03