Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0371 ATGGCAGAGGTAAAGATTATTGGGTCAGCTCCAAGCCTCTTCTGCACAAGGGTTGAATGGGCCTTGAAGCTTAAAGGAATTGAGTACGAGTACATTGCTGAAGACTTGAGAAACAAAAGTGAGCTGCTTCTCAAGTCCAACCCTGTGCTCAAGAAAGTGCCTGTGCTCTTGCACAATGGCAAAGCCATCTCCGAGTCGCTTATCATTCTCGAATACATCGACGAGACGTGGAAGGAGAACCCGATATTGCCTGAAGATCCATATGAAAGAGCCACAGCTCGCTTCTGGGCTAAGTTTTTAGATGACAAGGGCGTGTTCGGTGCCTGGGAAGCTTGTCAGGCTGAAGGAGAAGAGAAGGAGAAGGCTGTGGAGGCTGCAATACAAAATTTGGCACTGCTTGACAAAGAAATCCAAGGAAAGAAATTCTTTGGTGGAGAGAAAATTGGTTACCTGGATTTAGCTGCAGGTTGGATGTGCCACTGGCTCAATGTTCTGGATGAAGTTGGAGAAATGAACGTATTTGACAAAGAGAAGGTTCCATCCCTTCATGAATGGGCTCAAAACTTCATCCACATTCCAGTTATCAAAGAATCCCTTCCACCCAGAGAAAATCTTGTCAACTACTTCAAAGGGAGTCTGAGCTACGTCCGGTCGTTAGCTGCAAATAAGCAATAG 675 45.78 MAEVKIIGSAPSLFCTRVEWALKLKGIEYEYIAEDLRNKSELLLKSNPVLKKVPVLLHNGKAISESLIILEYIDETWKENPILPEDPYERATARFWAKFLDDKGVFGAWEACQAEGEEKEKAVEAAIQNLALLDKEIQGKKFFGGEKIGYLDLAAGWMCHWLNVLDEVGEMNVFDKEKVPSLHEWAQNFIHIPVIKESLPPRENLVNYFKGSLSYVRSLAANKQ 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3298201 3302033 + Hsped.09g03710.1 Hepe09g0371 579055

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0371 224 CDD GST_C_Tau 87 211 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe09g0371 224 CDD GST_N_Tau 4 77 - -
Hepe09g0371 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Hepe09g0371 224 Pfam Glutathione S-transferase, N-terminal domain 12 75 IPR004045 -
Hepe09g0371 224 FunFam Tau class glutathione S-transferase 1 85 - -
Hepe09g0371 224 SFLD Glutathione Transferase (cytosolic) 1 216 IPR040079 -
Hepe09g0371 224 Gene3D Glutaredoxin 1 82 - -
Hepe09g0371 224 SFLD Main.3: Omega- and Tau-like 1 216 IPR045073 -
Hepe09g0371 224 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Hepe09g0371 224 FunFam Tau class glutathione S-transferase 83 219 - -
Hepe09g0371 224 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Hepe09g0371 224 Pfam Glutathione S-transferase, C-terminal domain 119 186 - -
Hepe09g0371 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 210 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe09g0371 224 Gene3D - 83 218 - -
Hepe09g0371 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0371 K00799 - - csv:101217418 414.461
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0807 Hepe-Chr4:62111140 Hepe09g0371 Hepe-Chr9:3298201 6.80e-63 dispersed
Hepe05g1844 Hepe-Chr5:68767235 Hepe09g0371 Hepe-Chr9:3298201 3.97e-74 dispersed
Hepe06g0066 Hepe-Chr6:2009864 Hepe09g0371 Hepe-Chr9:3298201 8.34e-57 dispersed
Hepe07g2513 Hepe-Chr7:69459364 Hepe09g0371 Hepe-Chr9:3298201 4.84e-43 dispersed
Hepe09g0371 Hepe-Chr9:3298201 Hepe07g1403 Hepe-Chr7:46400513 1.10e-32 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g252 . . . . . . . . . . . Cma11g00299 . . Sed08g0385 . . Bhi02g00117 Tan09g1846 Cmetu02g0734 . Hepe09g0371 . . Cla06g01435 Cam06g1590 Cec06g1650 Cco06g1642 Clacu06g1551 Cmu06g1506 Cre06g2315 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi06g01302 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013759 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 0 1 1 1 1 1 1 1 3 25