Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0375 | ATGTCTCTCCGCAGCCACCACGACGGCGGTGACGAGGACCTTTCCTCCGGCGAGGAAGACGATGAAGACGATGTGGTTGATGAGGACATGGAAGCCCTCCGTCGAGCCTGTATGCTTGCTGGAGTTAATCCTCAGGAGTACATGAATCCTCCGTTGTCGTCCCCTACCGCCGGAGATGATTCTGATGATGTTGATGATCTCGAACTTGTTCAGAATATTCGGAATCGGTTCTCGATTCCGGCTGATGAGCAGCCTTTGAGTACTCTCCCACCCGTGTCCCCGGACGAGGAGGAAGACGATTTCGAGACGCTTCGTAGGATTCAGCAGCGCTTTTCCGCGTATGATGGTGATACTTTGAGCAATAAACCTGACCAGTCTTGTGACTTCGATGGGCCTCTGGATATGGATTCTAACAACACAGGTGTTGAGAGACAGACGTCTGCAGAAAGGTCACCTATGCTAGCCTTTGAAAAGGGAAGCTTGCCAAAGGCTGCGTTGTCATTTATTGATGCCATCAAGAAGAATAGGTCCCAGCAGAAGTTTATTCGTAGTAAGATGATTCACCTTGAAGCTAGAATCGAGGAGAACAAAAAGCTCAGAAAACGTTTCAAAATTCTCAAAGATTTCCAGGGTTTATGCAGAAGAAAAACAAGTTGTGCACTGTCTCAGATGATAGATCCTCGAGTCCAGTTAATGTCAGCTGGAAAACCACAGGTTACGGATTCATCAAAGAAGGACAAACGATTATCTGCAATGTATTATGGCCCAGCTGAGAATTCTCATGTTGCATGCTACAGAATGGCATTAACAAAGTTTTCACCTTCTGTAGATCGAAAAAGATGGTCCAATGTAGAGAGTGAGAATCTAGGGAAGGGAATAAGACAGCAATTTCAAGAGACGGTGCTTCAGATTTCAGTGGATCAAATTAGTGGCCTACAAGGATTTTCAGCAGATTCAGATGATCTTGATAACATTCTTGCATCAATAAAAGACCTAGACATTACTCCTGAAAAGATTAGGGAATTTCTGCCAAAAGTTAATTGGGACAAGTTGGCTTCCATGTATCTTCGAGGTCGCTCAGGGGCAGAATGTGAAGCGAGGTGGTTGAATTTTGAAGACCCCCTAATTAATCGAAATCCATGGACTACAAGTGAAGATAAGAATATTTTGTTTAATATCCAACAGAAAGGGTTGAATAACTGGATTGACATAGCAGTTTCATTGGGTACAAACAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGGAGTTTAAACGCTTCCATATTAAAGAGGGAGTGGACCAGAGATGAGGATGATAAACTTCGATCTGCTGTTGCTATTTTTGGTGTGGGAAATTGGCAAGCAGTAGCTTCTACTTTGGAAGGACGAACTGGTACACAGTGCTCTAATAGGTGGAAAAAATCCCTTGACCCAGCTAGGACAAAAAGAGGCCATTTCACTCCAGATGAAGACAGTCGCTTGAAAATTGCTGTACTGCTTTTTGGGCCTAAAAATTGGAACAAGAAAGCAGAATTTTTACCTGGTCGAAATCAAGTTCAATGCAGAGAAAGATGGTCCAATTGTTTAGATCCTTCCTTGAGAAGATGTAAATGGACAGAAGAGGAGGATATAAGGCTAGATATAGCTATTCAGGAGCATGGATATAGCTGGGCTAAGGTAGCTGCTTGTGTGCCGTCACGTACAGATAATGACTGCCGGAGGAGATGGAAGAAGTTATTTCCCAATGAAGTTCCTTTGCTCCAGGAAGCTAGAAAGATTCAGAAGGCTGCTCTTATTAGCAACTTTGTTGATAGGGAATCAGAGCGTCCTGCTCTTTGTCCTACTGACTTTCGACCTATACCAAATACAGATTTATTATGTAATACTGATGATCCAAAACCTGCCCCGAAAGGAAATGTGAAGATGAGAAGGATGCCAGTGACAAGGAATGAAAAGAGTGCTACTGGTAATGATCCAAAGAAGAGGAACTCAAATAACCAGAGGAATCAAGCTGATGCAACTGCTCAGGTGGGTATTGCAAATGATGTGTCTTCGGTCCCTGAGAAGGTTAAATCTAGAAAGCCTCAAAGAAAACGAAATAGACATGGAGCTTATACCGCTAAGATGAAAGGGGTTCTGGAGCACTGTTCGAACAATGAGAGCCTCGAGGTGCAGCTGAATAGTAAGGAATCAGAGAGGACCAACAGTGACTGCACCGAGACCGTTGATGAGAATGGTATGGAGGTATGTGAGAACAAAGTTGCAGAGAAGCTTTCTATAAGGGATGTGTGCTTTTCAGAACAAGAAGATATTCAAAACTCTACCGGATCTTCTGGAGTCTCGGTATTGTCAGAAATGACTAATGACATGGACGGGTATAATCCTTCTATTCTTCCAGATACAGCATTGCTGGCTATTACTAGTGGGGACGATATTATAGAAAGGAAGGGGGAGAGTGTTGCAGACGAAGATCTGGATGACAGTAACAGTTTCTCGTTACCGCCCAGTTGCTTAGAACTCAGGACAACTGACAGTGAAGGTGTCAACAGCTATTCTGTTGGTGAAATTACAGATAAAGACGACAGGATTTGCAAGCCCCAAGGCAGAAGGAAAAGAAACTGTAAAACATCAAATAAGAGCCAGGATTCATTGGTTTCTTGTCAACAAGTGGAGCTGGAGAGGCGGACGAAGCTAGAGCTTTGTCGTCTTAATCAATCAAAGAAGAGAAAACATAACAGTACGAATACGAGTCCATTGGGAAGATTGGAGGCAGTTGAAGAGGTTGATGACTGCACTCTCTTAAGCTTTTTGCAAAAAAGATCGAAGAGGACGCCAACAACAACCACACATGCCAAGAAAGTTGATGGTAGTTCTAGTAGTACTCCCCTAGAAGTTGATAATGACGATAATGATCCTACCATTGCTTCGCTTCTCAAGAATAAATTGAAGAGAAAAAAGCATCAAGTGCCAAAAGGATAA | 2982 | 43.19 | MSLRSHHDGGDEDLSSGEEDDEDDVVDEDMEALRRACMLAGVNPQEYMNPPLSSPTAGDDSDDVDDLELVQNIRNRFSIPADEQPLSTLPPVSPDEEEDDFETLRRIQQRFSAYDGDTLSNKPDQSCDFDGPLDMDSNNTGVERQTSAERSPMLAFEKGSLPKAALSFIDAIKKNRSQQKFIRSKMIHLEARIEENKKLRKRFKILKDFQGLCRRKTSCALSQMIDPRVQLMSAGKPQVTDSSKKDKRLSAMYYGPAENSHVACYRMALTKFSPSVDRKRWSNVESENLGKGIRQQFQETVLQISVDQISGLQGFSADSDDLDNILASIKDLDITPEKIREFLPKVNWDKLASMYLRGRSGAECEARWLNFEDPLINRNPWTTSEDKNILFNIQQKGLNNWIDIAVSLGTNRTPFQCLSRYQRSLNASILKREWTRDEDDKLRSAVAIFGVGNWQAVASTLEGRTGTQCSNRWKKSLDPARTKRGHFTPDEDSRLKIAVLLFGPKNWNKKAEFLPGRNQVQCRERWSNCLDPSLRRCKWTEEEDIRLDIAIQEHGYSWAKVAACVPSRTDNDCRRRWKKLFPNEVPLLQEARKIQKAALISNFVDRESERPALCPTDFRPIPNTDLLCNTDDPKPAPKGNVKMRRMPVTRNEKSATGNDPKKRNSNNQRNQADATAQVGIANDVSSVPEKVKSRKPQRKRNRHGAYTAKMKGVLEHCSNNESLEVQLNSKESERTNSDCTETVDENGMEVCENKVAEKLSIRDVCFSEQEDIQNSTGSSGVSVLSEMTNDMDGYNPSILPDTALLAITSGDDIIERKGESVADEDLDDSNSFSLPPSCLELRTTDSEGVNSYSVGEITDKDDRICKPQGRRKRNCKTSNKSQDSLVSCQQVELERRTKLELCRLNQSKKRKHNSTNTSPLGRLEAVEEVDDCTLLSFLQKRSKRTPTTTTHAKKVDGSSSSTPLEVDNDDNDPTIASLLKNKLKRKKHQVPKG | 993 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3332928 | 3342420 | - | Hsped.09g03750.1 | Hepe09g0375 | 579059 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Hepe09g0375 | 993 | Gene3D | - | 430 | 480 | - | - | |
Hepe09g0375 | 993 | SUPERFAMILY | Homeodomain-like | 481 | 577 | IPR009057 | - | |
Hepe09g0375 | 993 | SUPERFAMILY | Homeodomain-like | 410 | 480 | IPR009057 | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-like domain profile. | 273 | 372 | IPR001005 | - | |
Hepe09g0375 | 993 | CDD | SANT | 538 | 581 | IPR001005 | - | |
Hepe09g0375 | 993 | CDD | SANT | 433 | 477 | IPR001005 | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 531 | 585 | IPR017930 | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 14 | 28 | - | - | |
Hepe09g0375 | 993 | Gene3D | - | 538 | 584 | - | - | |
Hepe09g0375 | 993 | PANTHER | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 | 16 | 988 | IPR051575 | GO:0000978(PANTHER)|GO:0001006(PANTHER)|GO:0019185(PANTHER)|GO:0042795(PANTHER)|GO:0042796(PANTHER) | |
Hepe09g0375 | 993 | CDD | SANT | 380 | 425 | IPR001005 | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 483 | 530 | IPR017930 | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 645 | 659 | - | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-like domain profile. | 426 | 477 | IPR001005 | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 660 | 682 | - | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 624 | 703 | - | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 942 | 974 | - | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-like domain profile. | 373 | 425 | IPR001005 | - | |
Hepe09g0375 | 993 | Gene3D | - | 481 | 535 | - | - | |
Hepe09g0375 | 993 | Pfam | Myb-like DNA-binding domain | 484 | 530 | IPR001005 | - | |
Hepe09g0375 | 993 | Pfam | Myb-like DNA-binding domain | 431 | 475 | IPR001005 | - | |
Hepe09g0375 | 993 | Pfam | Myb-like DNA-binding domain | 378 | 423 | IPR001005 | - | |
Hepe09g0375 | 993 | Pfam | Myb-like DNA-binding domain | 536 | 580 | IPR001005 | - | |
Hepe09g0375 | 993 | Gene3D | - | 375 | 425 | - | - | |
Hepe09g0375 | 993 | CDD | SANT | 487 | 528 | IPR001005 | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 942 | 968 | - | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-like domain profile. | 531 | 581 | IPR001005 | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-like domain profile. | 479 | 530 | IPR001005 | - | |
Hepe09g0375 | 993 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 426 | 481 | IPR017930 | - | |
Hepe09g0375 | 993 | SMART | sant | 430 | 479 | IPR001005 | - | |
Hepe09g0375 | 993 | SMART | sant | 535 | 583 | IPR001005 | - | |
Hepe09g0375 | 993 | SMART | sant | 483 | 532 | IPR001005 | - | |
Hepe09g0375 | 993 | SMART | sant | 277 | 374 | IPR001005 | - | |
Hepe09g0375 | 993 | SMART | sant | 377 | 427 | IPR001005 | - | |
Hepe09g0375 | 993 | MobiDBLite | consensus disorder prediction | 77 | 101 | - | - | |
Hepe09g0375 | 993 | SUPERFAMILY | Homeodomain-like | 354 | 422 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe09g0375 | Hepe-Chr9:3332928 | Hepe10g1313 | Hepe-Chr10:48981852 | 6.06e-15 | dispersed | |
Hepe09g0375 | Hepe-Chr9:3332928 | Hepe09g0205 | Hepe-Chr9:1708330 | 1.53e-16 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56347 | PF00249 | Myb_DNA-binding | 1.60E-08 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0375 | K09422 | - | csv:101216287 | 1455.27 |