Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0393 ATGGAGAATCTTCTCGGACTTCTCCGTATTCGAATCATTCGTGGCGTCAATCTTGCTGTTCGTGATGTTCGTAGCAGCGATCCTTATGTTGTCGTCAAGATGGGAAAACAAAAATTGAAAACTCGGGTGATAAAGAAGGATGTCAATCCTGAATGGAATGAAGATCTAACTCTTTCTGTCAGTGACCCGAATACTCCAATTAAGCTGACTGTTTACGATCACGACACATTTTCTAAGGATGATAAAATGGGACATGCTGAGTTTGATATCAAATCATTTATGGAAGCTCTGAATATGAACTTGGACGATCTTCCCAGTGGAACTACAATCACACGAATGCTACCGTGCAGACAGAACTGTTTCGCTGAAGAGAGTTGTATCGTCTGGAAAGATGGTAAAGTAATCCAAGATATCTATCTTAGATTGAAAGACGTCGAATGTGGGGAAGTCGAAATCCAGTTGCAGTGGATCGAGCTTCCACACCCCAAAGGCTAA 495 41.82 MENLLGLLRIRIIRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSVSDPNTPIKLTVYDHDTFSKDDKMGHAEFDIKSFMEALNMNLDDLPSGTTITRMLPCRQNCFAEESCIVWKDGKVIQDIYLRLKDVECGEVEIQLQWIELPHPKG 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3530798 3533500 - Hsped.09g03930.1 Hepe09g0393 579077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0393 164 Pfam C2 domain 6 93 IPR000008 -
Hepe09g0393 164 SMART C2_3c 7 102 IPR000008 -
Hepe09g0393 164 CDD C2_ArfGAP 5 148 - -
Hepe09g0393 164 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Hepe09g0393 164 Gene3D C2 domain 3 163 IPR035892 -
Hepe09g0393 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 162 IPR044562 -
Hepe09g0393 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1016 Hepe-Chr2:12515958 Hepe09g0393 Hepe-Chr9:3530798 1.24e-83 dispersed
Hepe02g2647 Hepe-Chr2:73966681 Hepe09g0393 Hepe-Chr9:3530798 1.04e-70 dispersed
Hepe07g1451 Hepe-Chr7:48356005 Hepe09g0393 Hepe-Chr9:3530798 1.15e-38 dispersed
Hepe07g1452 Hepe-Chr7:48582484 Hepe09g0393 Hepe-Chr9:3530798 2.45e-41 dispersed
Hepe07g2353 Hepe-Chr7:67880684 Hepe09g0393 Hepe-Chr9:3530798 2.12e-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0393 - - - 0.0