Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0428 ATGTCTCGCCGAATACTCGAAGGAACCTCTCAAGATCAGATGAAGAGCTCTTCATCTCTGCTACATGCTCCACTTTTCTTCTTTTTCCTTGGGATGCTAGCTGTGCTGGTAATATTGTTGATTCTCATATTGATCTTTAGGAAATCTCTCAAACCGAATAAGGTGGTGAAACTATTAATACAAACTGGATCAACTCAAGCATCAGCAGATTTGTTAAGCGAGAACCTCCACTCATTAAGTTATTTCGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTAATCCGACAAATCTTCTAGGCCAGGGAGGATTTGGACCCGTCTATCTGGGAACGCTAGAAGAGGGAAGATTGGTTGCAATTAAGAAACTATCACTTAACAAATCCCAACAAGGAGAACCAGAATTTCTATCAGAGGTCAGACTAATAACAAGCATCCAACACAAGAACCTTGTTCGCCTGCTTGGTTGTTGCTCAGATGGGCCTCAACGGCTACTCGTGTATGAATACATGGAGAAAAGGAGTTTGGATCTCATAATATATGGGGGAAGCGACCAATTCCTCAACTGGAACGCCAGATTAAAGATTATCAGAGGCATTGCCAAAGGGTTGCAGTATCTACATGAGGATTCCCATCTAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAATTTCAACCAAAGATTGGTGATTTTGGGCTGGCCAGGTTCTTCCCTGATGATCAAGCTTACCTAAGCACTACATTTGCTGGAACACTAGGTTACACAGCACCAGAATATGCAATTAGGGGAGAACTGTCAGAGAAGGCAGATGTATACAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTGGCAGAAAGAACACAAATCTTTCTTTACCAACCGAAATGCAGTATCTTCCTGAATATGCATGGAAACTATATGAGAGGTCTGCCCTAACCGAACTTGTGGATCCAAAGATGAAGAATGATGGATATGTGGAGAAGGATGTAGCACATGCGATTCAGGTTGCTTTGTTATGCCTTCAGCCTCACGGCAATCTGAGACCTGCAATGTCTGAGATTGTTGCCATGCTAACATACAAATTTGAAATCGTTCAAACGCCTTTAAAACCAGCTTTCTTGGAAAGAAGGCATAGAAAGAACAGAGATCTCTCGTTGACTAGTTATGCAGATGCCACTCCTTCTCCATTACAGTGA 1218 41.63 MSRRILEGTSQDQMKSSSSLLHAPLFFFFLGMLAVLVILLILILIFRKSLKPNKVVKLLIQTGSTQASADLLSENLHSLSYFDFHTLKKATKNFNPTNLLGQGGFGPVYLGTLEEGRLVAIKKLSLNKSQQGEPEFLSEVRLITSIQHKNLVRLLGCCSDGPQRLLVYEYMEKRSLDLIIYGGSDQFLNWNARLKIIRGIAKGLQYLHEDSHLRIIHRDIKASNILLDDKFQPKIGDFGLARFFPDDQAYLSTTFAGTLGYTAPEYAIRGELSEKADVYSFGVLVLEIISGRKNTNLSLPTEMQYLPEYAWKLYERSALTELVDPKMKNDGYVEKDVAHAIQVALLCLQPHGNLRPAMSEIVAMLTYKFEIVQTPLKPAFLERRHRKNRDLSLTSYADATPSPLQ 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3878919 3880978 - Hsped.09g04280.1 Hepe09g0428 579112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0428 405 Gene3D Transferase(Phosphotransferase) domain 1 171 374 - -
Hepe09g0428 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0428 405 CDD STKc_IRAK 100 366 - -
Hepe09g0428 405 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 33 389 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Hepe09g0428 405 SUPERFAMILY Protein kinase-like (PK-like) 74 366 IPR011009 -
Hepe09g0428 405 Pfam Protein kinase domain 97 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0428 405 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Hepe09g0428 405 ProSiteProfiles Protein kinase domain profile. 94 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0428 405 FunFam Cysteine-rich receptor-like protein kinase 2 171 373 - -
Hepe09g0428 405 SMART serkin_6 94 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0428 405 FunFam Cysteine-rich receptor-like protein kinase 10 60 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1930 Hepe-Chr7:63081193 Hepe09g0428 Hepe-Chr9:3878919 8.48e-94 dispersed
Hepe09g0428 Hepe-Chr9:3878919 Hepe10g0034 Hepe-Chr10:310344 5.62e-94 dispersed
Hepe09g0428 Hepe-Chr9:3878919 Hepe01g0555 Hepe-Chr1:65469028 8.20e-100 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73116 PF00069 Pkinase 6.30E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0428 - - - 0.0