Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0457 ATGATATTGCCCTATTCCTTAGGTCAGTTCTTTGTCAAAGGCCTAGAATGCCATTGCTTCTCGGCTTTCAAATGCAAATTGACGTATTTCATTTCTTCAGAGTCTACAGAGAGAAGTAAGCTTGAGTTTGATTATCTACAAATCCAGAGTATTGCAATTGCAATTGCTTATGGTATCTGTTTATGCCGATTCAATTCCGGCCAGAGTTTCCAACTTCAGAGATCACCGGCAGAAGAAACACAGAGCGATCCCCTTCGTTTTTTCCAATCTCCTCGAGCTACAGTTCCATGTGTAGGTACACTTGAAGCCACAGTTATTGGTTTTATTGTGCAAATTCTATGTGAAAAGACATTGGGGATGAATATGAGAGGTGCTGGAAGGGGATTGACCCAGAAGGAATCTGGGAAATGTTCTCACTCCATGCTGGAAACTGGATCAGAGTTGATCTTACCTCTGAAGTTGAAAAGGTGTAGCAAAATATCCCATTCCAAACAGAAAAAATCAAGAACAAAATCACATGCACAGCCAATTAGTTCAACATTCAAGAGGAGACCTCTTCCTAAATCCTTGAGCAAGGGGAATAAAAATGTGACAATTAGACAACTGGCTGGTAAAAAAATTCTGCTAAAAAAACTTGATACAAAATCGTCCAAGGAGTTACTTTTGTCAAAGCTTCAAGGTGGAAAATCCCTGCCATCAACTAATAGGAAAGGGAATGCAGAAAAGGTTGAGCCGGTGGCCAAGATAAACCAACAAAGGAAAAGGAGGAAGAACAAAGGAAAAAAGGAAGAAGTGGAGTTCGATGAAGCTTCTCGCCTAAAGAGGAGAACAAGATACCTTATAATTAAAATGAAGCTAGAGCAGAACCTTATCGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAAATTAAGCCTGAAAAGGAACTTCAGAGAGCCAAGAAGCAGATATTGAAGTGCAAACTTGGAATCCGTGATGCTATTCGCCAGCTGGGTTTGCTTGGTTCAGTAGGATGCATGGAAGACTCTGTTATTGGTCCTGATGGATCTGTCTACCACGAACATATATTCTGTGCAAAATGCAAGTTAGGTGAAGCTTTTCCAGACAATGACATTATACTTTGCGATGGGACATGCAACTGTGCTTTTCACCAAAAATGTCTGGATCCACCATTAGACACGAAAAATATTCCTCCAGGAGACCAGGGTTGGTTTTGCAAATTCTGTGTGTGCAAGATGGAAATATTGGAAGGAATGAATGCACATCTTGGTACTCGGTTCTCATCGAACATTAATTGGGAGGACGTTTTCAAAGAAGAAGCTGCTTTCCCAGATGGTGGAAATGCATCGCTTAATCATGAGGAAGATTGGCCCTCAGATGATTCTGAAGATGATGACTATGATCCAGATAAGAAGGAGAATGGCTATGACAACCTAAGTGGGGAAGAAAATGATAAGCATGTTTTGGAGGAGTCGAGTAGTTCAACCAGCTTGAGTTGGTCTTTAGATGGCGAGGATTTAACGGATAGAGATGGTATTGGATGTGAAGAACACTTTGGTGCTGGTTGCAGCATAGTTTCTGATGGATCCAATGAAGAGGGTATCACATGTAGCCGTCGGCAGCGACAGGCTGTTGATTATAAAAAGTTATTTGTCGAAATGTTTGGAAAGGATGCTCCAGCACAAGAAGAACAAGTTAGTGAAGATGAAGATTGGGGACCTGCAAAAAGAAGACGAAGAGAAAAGGAATGTGATGCTGCAAGTACTCTTATGTCCCTTTGTGAAAGCGAAAAAAAGAGTCAAGACATTGACATGGAAGCAGAGAAAAAGCTTCTCAATTCGCGAAGTAGATCATTTTTCAGAATTCCTCTTTATGCAGTCGAGAAACTTCGCCAAGTGTTTGCTGATAATGAACTTCCCTCTAAAGAAGTCAAGGAGAACCTTTCAAAAGAATTGGGTCTTGATGCTGAAAAGGTCAGCAAATGGTTCAAGAATGCACGATATTCTGCACTAAGAACTCGAAAGGCAGAGGGAGCAACACAATCTCATAGTTCTAATAAGACTTCCGAGGAGTCCAGATTAGCAGATCCAAAGGAAATGACTGAGAATCGTCTTTCATCAGAGGACGCACCAATAAAAGAACTGCAGTTGAAGTTGCACAATAGTCATTACAAGAAAAAGCAGCACAGAAAATCATTACTTGTATCTTCCAACAATAACAAGGAGGCTTTTGATTTTGGTGATGACATAAGCTTGAAGAATCTCCTAAAGAATAGAAAAACAAAGGTAAAGAAGAGGGTTAACTTTGTAGCTAGAGGTGGAAGTCAAGAAGCAGAAGTGGAGATGGAGAGACTGTGTAAAATTAAGGGTAGATTAGAGATAATGAAGCAAACATTACTTAGACTATCAAATAAGAAAAATGATGGTTCACACATGTTTGAACAATCTATTGTATATGTTCCTGTGGCAGTGTTAAAGGAAAAGGTTTGA 2499 40.26 MILPYSLGQFFVKGLECHCFSAFKCKLTYFISSESTERSKLEFDYLQIQSIAIAIAYGICLCRFNSGQSFQLQRSPAEETQSDPLRFFQSPRATVPCVGTLEATVIGFIVQILCEKTLGMNMRGAGRGLTQKESGKCSHSMLETGSELILPLKLKRCSKISHSKQKKSRTKSHAQPISSTFKRRPLPKSLSKGNKNVTIRQLAGKKILLKKLDTKSSKELLLSKLQGGKSLPSTNRKGNAEKVEPVAKINQQRKRRKNKGKKEEVEFDEASRLKRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEKELQRAKKQILKCKLGIRDAIRQLGLLGSVGCMEDSVIGPDGSVYHEHIFCAKCKLGEAFPDNDIILCDGTCNCAFHQKCLDPPLDTKNIPPGDQGWFCKFCVCKMEILEGMNAHLGTRFSSNINWEDVFKEEAAFPDGGNASLNHEEDWPSDDSEDDDYDPDKKENGYDNLSGEENDKHVLEESSSSTSLSWSLDGEDLTDRDGIGCEEHFGAGCSIVSDGSNEEGITCSRRQRQAVDYKKLFVEMFGKDAPAQEEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKKSQDIDMEAEKKLLNSRSRSFFRIPLYAVEKLRQVFADNELPSKEVKENLSKELGLDAEKVSKWFKNARYSALRTRKAEGATQSHSSNKTSEESRLADPKEMTENRLSSEDAPIKELQLKLHNSHYKKKQHRKSLLVSSNNNKEAFDFGDDISLKNLLKNRKTKVKKRVNFVARGGSQEAEVEMERLCKIKGRLEIMKQTLLRLSNKKNDGSHMFEQSIVYVPVAVLKEKV 832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4117038 4126477 + Hsped.09g04570.1 Hepe09g0457 579141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0457 832 MobiDBLite consensus disorder prediction 692 714 - -
Hepe09g0457 832 Pfam PHD-finger 361 412 IPR019787 -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 227 267 - -
Hepe09g0457 832 ProSiteProfiles 'Homeobox' domain profile. 616 676 IPR001356 GO:0003677(InterPro)
Hepe09g0457 832 SMART HOX_1 616 680 IPR001356 GO:0003677(InterPro)
Hepe09g0457 832 SUPERFAMILY FYVE/PHD zinc finger 351 418 IPR011011 -
Hepe09g0457 832 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 154 828 - GO:0003677(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0006325(PANTHER)|GO:0006355(PANTHER)
Hepe09g0457 832 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 352 409 IPR013083 -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 172 195 - -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 676 714 - -
Hepe09g0457 832 ProSitePatterns Zinc finger PHD-type signature. 361 412 IPR019786 -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 160 195 - -
Hepe09g0457 832 FunFam pathogenesis-related homeodomain protein-like 352 412 - -
Hepe09g0457 832 SMART PHD_3 360 413 IPR001965 -
Hepe09g0457 832 ProSiteProfiles Zinc finger PHD-type profile. 358 415 IPR019787 -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 472 493 - -
Hepe09g0457 832 CDD homeodomain 618 677 IPR001356 GO:0003677(InterPro)
Hepe09g0457 832 CDD PHD_PRHA_like 360 412 IPR045876 -
Hepe09g0457 832 Gene3D - 623 692 - -
Hepe09g0457 832 Pfam Homeodomain 629 671 IPR001356 GO:0003677(InterPro)
Hepe09g0457 832 SUPERFAMILY Homeodomain-like 618 681 IPR009057 -
Hepe09g0457 832 FunFam pathogenesis-related homeodomain protein 618 682 - -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 563 583 - -
Hepe09g0457 832 MobiDBLite consensus disorder prediction 447 506 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0384 Hepe-Chr9:3422002 Hepe09g0457 Hepe-Chr9:4117038 9.64e-51 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56353 PF00628 PHD 1.40E-09 CL0390 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0457 - - - 0.0