Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0491 ATGGCGACGCCCGATCCGTCACCGGAATTCATATTCCGATCAAAACTGCCGGACATCTTCATCCCCAACCACCTCCCCTTGCACACATATTGCTTCGAAAAGATCTCCGAATTCAAACACCGTCCATGTCTAATCAACGCCGCCACCGGCGACACCCACACCTACGCCGAAGTCCACGCAACATCCCGGCGAGTCGCCGCCGGTCTCCACAAGCTCGGCATCGGAAAAGGCGACGTAATCATGCTCCTCCTCCAAAACAGCCCACAGTTCGTCCTAGCTTTCCTCGGCGCCTCCATTGTCGGTGCCGCCTCCACCACGGCGAACCCATTCTTCACACCACCGGAGATCGCAAAACAAGCAGCGTCCTCCGGCGCAAAGCTGATCATAACCCAAGCTGCATTCGCCGAGAAAGTGAAAAACCTCCGTCATGAAAACGGCGTGATCATCAAAGTCATATTCATCGACGACGACGGTGGGTCCCATTTTTCGGTTTTGACCGATCACGGAAAAGAAGAGGAAATAATAATCCCCGATGTGAAAATCAGTCCAAACGACGTCGTTGCGCTGCCTTATTCATCTGGGACCACAGGGTTACCAAAGGGAGTGATGCTGACTCATAAGGGATTGGTGACCAGCGTGGCGCAACAGGTGGACGGTGAGGATCCGCACCTCCACATCGGATGCAACGACGTCGTTTTGTGCGTGCTTCCTTTGTTTCACATATATTCGCTGAACTCGATCATGATGTGTTCGTTGCGAGTCGGAGCCGCGATTTTGATCGTACAGAAATTCGAAATGAATTCAATTGTGGAGTTGGTGCCGAAATATAAGGTGACGATAGCGCCGTTTGTGCCTCCGATTGTATTGGCGATTGCCAAGAGTCCGGCGGTGGAGGGTTCCGACATGTCGTCGATACGGATGGTGTTGTCGGGAGCGGCACCGCTGGGAAAGGATCTTGAAGATGCCTTTAGAGCCAAACTTCCACATGCCATACTCGGACAGGGATATGGAATGACGGAATCGGGGTCGGTGATGACGATGTCGTTGGCGTTTGCAAAAGAGAAGTTCGAAGTAAAATCGGGAGGTTGTGGGACATTGATGAGAAATTCAGAGATGAAGATCATAAATCCTCAAACGGGAGCTTCTCTTCCAAGGAATCAACCTGGGGAGATTTATGTTAGAAGTCCTCAGTTGATGAAAGGATACCTCAACGACGAAGCGGCCACGAAGGGCATAATCGACGAAGACGGATGGCTGCACACCGGCGACATAGGTTTCGTCGACGACGACGACGAGGTCTTCATCGTCGATCGCCTCAAGGAACTGATCAAATACAAAGGCTTCCAGGTGGCGCCGGCGGAGTTGGAAGCTCTCCTGATTTCCCACAGTCACATCGCTGACGCTGCGGTTATACCTATGAAAGATGAAGTTGCTGGAGAAGTTCCGGTTGCGTTCATTGTTCGATCCGACGGTTCCAACATCACCGAGGATGAAATTAAGCAATTCATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATAGTGTCTTCTTCGTGGATTCCATTCCTAAAAGCCCTTCTGGAAAAATCTTGCGGAGACAACTTAGAGCTTTGCTCGCAGCCAGTATTCCAAATTAG 1638 50.92 MATPDPSPEFIFRSKLPDIFIPNHLPLHTYCFEKISEFKHRPCLINAATGDTHTYAEVHATSRRVAAGLHKLGIGKGDVIMLLLQNSPQFVLAFLGASIVGAASTTANPFFTPPEIAKQAASSGAKLIITQAAFAEKVKNLRHENGVIIKVIFIDDDGGSHFSVLTDHGKEEEIIIPDVKISPNDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEDPHLHIGCNDVVLCVLPLFHIYSLNSIMMCSLRVGAAILIVQKFEMNSIVELVPKYKVTIAPFVPPIVLAIAKSPAVEGSDMSSIRMVLSGAAPLGKDLEDAFRAKLPHAILGQGYGMTESGSVMTMSLAFAKEKFEVKSGGCGTLMRNSEMKIINPQTGASLPRNQPGEIYVRSPQLMKGYLNDEAATKGIIDEDGWLHTGDIGFVDDDDEVFIVDRLKELIKYKGFQVAPAELEALLISHSHIADAAVIPMKDEVAGEVPVAFIVRSDGSNITEDEIKQFISKQVVFYKRINSVFFVDSIPKSPSGKILRRQLRALLAASIPN 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4565972 4570077 + Hsped.09g04910.1 Hepe09g0491 579175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0491 545 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Hepe09g0491 545 Gene3D - 441 542 IPR045851 -
Hepe09g0491 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 440 - -
Hepe09g0491 545 CDD 4CL 21 535 - -
Hepe09g0491 545 Gene3D - 9 440 IPR042099 -
Hepe09g0491 545 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Hepe09g0491 545 SUPERFAMILY Acetyl-CoA synthetase-like 14 541 - -
Hepe09g0491 545 Pfam AMP-binding enzyme 34 403 IPR000873 -
Hepe09g0491 545 FunFam 4-coumarate--CoA ligase 2 441 542 - -
Hepe09g0491 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 536 - GO:0016405(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2135 Hepe-Chr7:65667156 Hepe09g0491 Hepe-Chr9:4565972 2.88e-103 dispersed
Hepe09g0491 Hepe-Chr9:4565972 Hepe10g1506 Hepe-Chr10:51833254 1.76e-129 dispersed
Hepe02g1621 Hepe-Chr2:21646826 Hepe09g0491 Hepe-Chr9:4565972 5.79e-22 transposed
Hepe02g2476 Hepe-Chr2:71233207 Hepe09g0491 Hepe-Chr9:4565972 5.61e-19 transposed
Hepe08g2161 Hepe-Chr8:60864587 Hepe09g0491 Hepe-Chr9:4565972 3.11e-261 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0491 K01904 - csv:101218077 864.374