Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0493 ATGGCAGCCCTCCAAATCCATGGCACCGAAACCGAAATCTCCTCCGAGTTCCTCACAGCTCGAATCATCGACCTCCATGAAAGCATCTCGAAGCTCGAAACCCTAAGGCCGTGCAAGAAAGTAAACACCCTCTTCACCAACCTGGTCAACTTGTGCATTTTGCCCTCTTCAATAGATGTTTCGACATTGCCACCCCATATACAAGCCATTCGTGAGAGCCTCATAGTTCTCTGTGGCCGAGCCGAGGGCCTACTCGAGTTCGAATTCTCGACCTTGCTCACCAAAGTCCCCAAACCTCTCAACAATCTCACTCTATTTCCATATTACCACAACTACATCAAATTAGCCCACCTTGAGAACAAGATTTTGAATGACAATGGAGTTGTCCATCCAAAAAAGGTAGCCTTTGTCGGGTCGGGTCCTTTGCCTCTAACATCCATTATTTTGGCCATGCAGCACATGAAGAGCACGTATTTCGATAATTACGACGTCGACAGCGCGGCAAATGACGTGGCGAGAAAGATCGTGGCGTCGGATGCTGAGCTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAGGAGAAGAGCTTGGGGGATATGATTGTGTGTTTTTGGCAGCTCTTGTGGGGATAAAGAAGGAAGATAAAGTGAAGATTTTAGGGCATTTGAGAAAGTATATGAAAGAAGGAGGAATTTTGGTTGTGAGAAGTGCTAAAGGAGCAAGAGGGTTTTTGTACCCTGTGGTTGAGTTTCATGATTTGGTTGGCTTTGAAGTTCTCACTATTTTTCATCCCACTGATGATGTTGTCAATTCGGTTCTCTTAGCTCGCAAGCCTATTATTATATGA 858 45.57 MAALQIHGTETEISSEFLTARIIDLHESISKLETLRPCKKVNTLFTNLVNLCILPSSIDVSTLPPHIQAIRESLIVLCGRAEGLLEFEFSTLLTKVPKPLNNLTLFPYYHNYIKLAHLENKILNDNGVVHPKKVAFVGSGPLPLTSIILAMQHMKSTYFDNYDVDSAANDVARKIVASDAELEGRMKFWTRDIVEVGEELGGYDCVFLAALVGIKKEDKVKILGHLRKYMKEGGILVVRSAKGARGFLYPVVEFHDLVGFEVLTIFHPTDDVVNSVLLARKPIII 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4585482 4586339 + Hsped.09g04930.1 Hepe09g0493 579177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0493 285 Gene3D Vaccinia Virus protein VP39 14 282 IPR029063 -
Hepe09g0493 285 PANTHER NICOTIANAMINE SYNTHASE 3 12 282 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Hepe09g0493 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 285 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Hepe09g0493 285 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Hepe09g0493 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 269 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2257 Hepe-Chr8:62313995 Hepe09g0493 Hepe-Chr9:4585482 1.69e-85 dispersed
Hepe09g0493 Hepe-Chr9:4585482 Hepe09g1731 Hepe-Chr9:53995278 2.06e-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0493 K05953 - csv:101209464 475.707