Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0511 ATGGGAATTGATTGTCAAAGTGTTGTGAAGGGCTTCCGTGGCGGATGGGGCGTCGTCGCTAAGCCATGCGACTCCTGCAAGACTGGGGCTGCCGCTGTCTACTGTCGTCCGGACTCTGCTTTCCTCTGTCTCAACTGCGACGCCAAAATTCACTGCGCTAATAAGCTCTCCTCTCGCCACGAGCGTGTCTGGATGTGCGAGGTCTGCGAACAAGCTCCCGCCGTCGTCATGTGTAAGGCCGATGCTGCCGCTCTCTGTGTCACGTGCGATGACGATATTCACTCCGCTAACCCATTGGCTCGTCGCCACGAGCGTGTCCCTGTCCAGCCTTTTTTTGACACGGCTGAGTCTGTCGTCAAATCCTCTTCCGTTCTCAATTTCCTCGTGCCCACTGACCCCAACTGCGACGCCGCCCACGAGGAGGTGGAGGTTGCCTCCTGGCTTTTATCCAACCCGACTTTCAACTCTAAGCTCGTTGACAGCCCTGAAATCAAGCCCCCTGTTGATCATTTGTTCTTCACCGAAATGGATTCTTTTATTGATTTTGATTACCCAAATCCAGTCAACAACCACACCGCAATTCACGACAGCGTCGTCCCCGTTCAGACGAAGCCACTCTCTACGCCGGCGATCAATCATACCCATGCCCATACCCACTCCCCGGAAAATTTCTACGATATCGATTTTTGCAGATCCAAGCTCAATTCATTCGGATATCAACCTCAATCCCTCAGCCACAGTGTTTCGTCTTGCTCCCTAGACGTCGGAGTAGTTCCAGAAGGGAATTCGATGTCGGAAATATCGTACCCGTTGGGTCAACCGGCGAGTAGCGGTGCAGATTCGGGTTTAGTGATGTCGAACCAGGCGACTCAATTGTGCGGAATGGATCGGGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAATCGGAAGTTTGAGAAGACGATCCGGTACGCTTCAAGAAAAGCTTATGCGGAAACCCGACCCAGAATCAAAGGCCGGTTCGCCAAACGGACCGATACGTTATCGGAGGTTGATGAATTCTATGGATCCGCTGCGTCGTCTGTGTTCTTGCCGGACGCCCAATACGGCGTCGTTCCAACGTTTTGA 1113 53.01 MGIDCQSVVKGFRGGWGVVAKPCDSCKTGAAAVYCRPDSAFLCLNCDAKIHCANKLSSRHERVWMCEVCEQAPAVVMCKADAAALCVTCDDDIHSANPLARRHERVPVQPFFDTAESVVKSSSVLNFLVPTDPNCDAAHEEVEVASWLLSNPTFNSKLVDSPEIKPPVDHLFFTEMDSFIDFDYPNPVNNHTAIHDSVVPVQTKPLSTPAINHTHAHTHSPENFYDIDFCRSKLNSFGYQPQSLSHSVSSCSLDVGVVPEGNSMSEISYPLGQPASSGADSGLVMSNQATQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTLSEVDEFYGSAASSVFLPDAQYGVVPTF 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4751592 4753274 + Hsped.09g05110.1 Hepe09g0511 579195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0511 370 Pfam B-box zinc finger 62 108 IPR000315 GO:0008270(InterPro)
Hepe09g0511 370 CDD Bbox1_BBX-like 66 108 IPR049808 -
Hepe09g0511 370 SMART bboxneu5 18 65 IPR000315 GO:0008270(InterPro)
Hepe09g0511 370 SMART bboxneu5 66 108 IPR000315 GO:0008270(InterPro)
Hepe09g0511 370 CDD Bbox1_BBX-like 22 65 IPR049808 -
Hepe09g0511 370 ProSiteProfiles Zinc finger B-box type profile. 23 65 IPR000315 GO:0008270(InterPro)
Hepe09g0511 370 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270(InterPro)
Hepe09g0511 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 16 355 IPR045281 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0009909(InterPro)|GO:0009909(PANTHER)
Hepe09g0511 370 ProSiteProfiles CCT domain profile. 297 339 IPR010402 GO:0005515(InterPro)
Hepe09g0511 370 Pfam CCT motif 297 339 IPR010402 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1157 Hepe-Chr1:76692271 Hepe09g0511 Hepe-Chr9:4751592 1.38e-08 dispersed
Hepe09g0339 Hepe-Chr9:2975870 Hepe09g0511 Hepe-Chr9:4751592 2.03e-08 dispersed
Hepe09g0511 Hepe-Chr9:4751592 Hepe03g0312 Hepe-Chr3:4286654 4.43e-06 dispersed
Hepe02g0897 Hepe-Chr2:10751791 Hepe09g0511 Hepe-Chr9:4751592 6.02e-30 transposed
Hepe10g0202 Hepe-Chr10:2065897 Hepe09g0511 Hepe-Chr9:4751592 1.79e-30 transposed
Hepe08g2141 Hepe-Chr8:60549573 Hepe09g0511 Hepe-Chr9:4751592 3.12e-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56358 PF00643 zf-B_box 3.70E-07 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0511 - - - 0.0