Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0522 ATGGAATTCAGGAAGGAAAAGCTTGTTAGGTTTTATTCTGATCACAAAAAACATAAAAAATCTGCCATTGGAAACAACAATGAAGCGGTGCAACTTGAGAAGTCATCATCGAAATACTATATTCCATCGTCAACGTTCTTAATACCAGAGTATGGGCTAGGGGGAAGCAAAAGTAAATTTGCCGAAACCTTTAGAACCGAGAAGTCTAAGGTGTTTCCAGAGGACCATGAACCATGGAGCAAAAGAATACTAGACCCTGGTAGCAAAATTGTTTTGAAATGGAATCGGGTGTTCATTTGCGCATGCTTATTGGCACTCTTTGTTGACCCGCTGTATCTTTTCTTGCCTACTTTGAATGGGAAGGGGAAATCCTCATGTGTGAGGACAGACTGGAAATTGAGAATTATTGTGACCTGTTTCCGGACTGTTGCAGATTTTTTCTATCTTCTGCACATGATTATAAAGTTCAGAACAGCTTATGTTGCTCCGAGCTCTCGAGTTTTTGGGAGAGGTGAGCTTGTGATGGATTCAAAGATGATAGCAAAGAGGTATATTAGATCTGACTTTTTCGTCGATCTAATTGCCACCCTACCTCTCCCTCAGATTGTCATCTGGTTCATCATACCCGCAACAAGAAGTCGTTTAACTGATCATAAAAACAATGCTCTTGCACTTATTGTTCTGCTTCAATATATTCCGAGATTGTATTTGATTTTCCCACTGAGTTCAGAAATCATCAAAGCAAATGGAGTTGTTACAAAGACAGCTTGGGCAGGAGCTGCTTATAATCTTCTACTCTATATGTTGGCTAGCCATGTTCTAGGTGCTACATGGTATTTGCTGTCAGTTGATAGATATACATCATGCTGGAAATCATTTTGTAGGAAAAAGGAATTTAATCCACTAGAATGCAACCTAACTTTTTTTGATTGCGACACATTTAACCTTAATGACCGCAATACATGGGCAAATGGTACACTTGTTTTTGACAAATGTGGCCCTGATGGAATTTTCAAGTTTGGCATTTTTGGGAATGCAATGTCAAAGAATGTTGTCTCTTCAAGCTTTATTGAAAAGTACTTCTATTGTTTGTGGTGGGGCTTGCAAAACCTGAGTTCATATGGACAGAATTTGGAAACAACCACTTTCATCGGTGAGACAGTGTTTGCTGTGCTCATTGCCATCGTAGGGCTTGTATTATTTGCCCATCTGATTGGGAATATGCAGACGTATCTGCAATCCCTCACTGTGAGGCTTGAAGAATGGAGACTAAAGCGAAGGGACACTGAAGAGTGGATGAGACATCGTCAACTCCCTGAAGACTTGAAACGACGTGTTCGACGTTTTGTACTGTATAAGTGGGTAGCAACTCGAGGAGTTGATGAAGAAGCCATCTTGCAGGGTTTGCCCGCTGATCTTCGACGTGATATTCAATGCCGCCTATGTCTAGATCTTGTCCGACGAGTCCCTTTCTTCGCACAGATGGATGATCAGCTACTTGATGCAATATGTGAACGCCTGGTATCCTCCTTGAGCACTGAGGGTACCTATATTGTACGAGAGGGTGACCCGGTAACAGAGATGTTATTCATTATCCGAGGCAGATTAGAGAGTTCTACCACAAATGGAGGTCGCTCTGGTTTCTTCAACTCCATAATGTTGCGTCCCGGAGACTTTTGTGGGGAGGAACTACTTTCTTGGGCCTTGCACCCAAAATCCACCACCAACTTGCCCTCCTCAACTAGAACAGTCAAAGCGCTCAATGAAGTTGAAGCTTTTGCACTCCGTGCTGAAGATCTTAAATTTGTGGCCAACCAATTTAGACGCCTGCACAGTAAAAAATTGCAGCACACATTCCGCTTTTACTCTCATCATTGGAGAACATGGGCAGCTTGCTTTATTCAGGCTGCTTGGCATCGTTATAAGAAAAGGATGATGGCAAAAGATCTCTTAATGAAGGAATCATTTACATTGTCTGAAACAGTGGCCGATGAAACTGGCCAAGGAGGAGGGGAACAATTTTCTGTTGTTTCAAATCCTTCTCAGACAAAAATGCATCTGGATGTAACCTTACTGGCTTCAAGGTTTGCTGCAAACACGAGGAGAGGTGCTCAGAGAATGAAAGATGACTTGCCAAAGTTACAGAAGCCCGAAGAACCCGACTTTTCCATTGAGCCAGACAGATAA 2187 42.2 MEFRKEKLVRFYSDHKKHKKSAIGNNNEAVQLEKSSSKYYIPSSTFLIPEYGLGGSKSKFAETFRTEKSKVFPEDHEPWSKRILDPGSKIVLKWNRVFICACLLALFVDPLYLFLPTLNGKGKSSCVRTDWKLRIIVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDSKMIAKRYIRSDFFVDLIATLPLPQIVIWFIIPATRSRLTDHKNNALALIVLLQYIPRLYLIFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGATWYLLSVDRYTSCWKSFCRKKEFNPLECNLTFFDCDTFNLNDRNTWANGTLVFDKCGPDGIFKFGIFGNAMSKNVVSSSFIEKYFYCLWWGLQNLSSYGQNLETTTFIGETVFAVLIAIVGLVLFAHLIGNMQTYLQSLTVRLEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFVLYKWVATRGVDEEAILQGLPADLRRDIQCRLCLDLVRRVPFFAQMDDQLLDAICERLVSSLSTEGTYIVREGDPVTEMLFIIRGRLESSTTNGGRSGFFNSIMLRPGDFCGEELLSWALHPKSTTNLPSSTRTVKALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWHRYKKRMMAKDLLMKESFTLSETVADETGQGGGEQFSVVSNPSQTKMHLDVTLLASRFAANTRRGAQRMKDDLPKLQKPEEPDFSIEPDR 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4885919 4892633 - Hsped.09g05220.1 Hepe09g0522 579206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0522 728 PRINTS EAG/ELK/ERG potassium channel family signature 269 279 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe09g0522 728 PRINTS EAG/ELK/ERG potassium channel family signature 152 161 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe09g0522 728 PRINTS EAG/ELK/ERG potassium channel family signature 404 413 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe09g0522 728 PRINTS EAG/ELK/ERG potassium channel family signature 454 461 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe09g0522 728 PRINTS EAG/ELK/ERG potassium channel family signature 360 377 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe09g0522 728 PRINTS EAG/ELK/ERG potassium channel family signature 386 397 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe09g0522 728 CDD CAP_ED 491 622 IPR000595 -
Hepe09g0522 728 FunFam Cyclic nucleotide-gated ion channel 1 489 607 - -
Hepe09g0522 728 Pfam Ion transport protein 96 418 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe09g0522 728 Gene3D Jelly Rolls 489 609 IPR014710 -
Hepe09g0522 728 SUPERFAMILY cAMP-binding domain-like 421 613 IPR018490 -
Hepe09g0522 728 MobiDBLite consensus disorder prediction 702 728 - -
Hepe09g0522 728 SMART cnmp_10 491 622 IPR000595 -
Hepe09g0522 728 Pfam Cyclic nucleotide-binding domain 514 603 IPR000595 -
Hepe09g0522 728 SUPERFAMILY Voltage-gated potassium channels 86 413 - -
Hepe09g0522 728 Gene3D Helix hairpin bin 419 482 - -
Hepe09g0522 728 Gene3D - 97 416 - -
Hepe09g0522 728 ProSiteProfiles cAMP/cGMP binding motif profile. 491 575 IPR000595 -
Hepe09g0522 728 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 709 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2096 Hepe-Chr1:85570136 Hepe09g0522 Hepe-Chr9:4885919 0.0 dispersed
Hepe04g0941 Hepe-Chr4:63700715 Hepe09g0522 Hepe-Chr9:4885919 2.70e-231 dispersed
Hepe08g0898 Hepe-Chr8:8194439 Hepe09g0522 Hepe-Chr9:4885919 1.36e-258 dispersed
Hepe08g2208 Hepe-Chr8:61746422 Hepe09g0522 Hepe-Chr9:4885919 1.27e-245 dispersed
Hepe09g0191 Hepe-Chr9:1516181 Hepe09g0522 Hepe-Chr9:4885919 9.13e-282 dispersed
Hepe09g0522 Hepe-Chr9:4885919 Hepe02g1860 Hepe-Chr2:28925007 9.80e-295 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0522 K27629 - csv:101218643 1372.45