Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0542 | ATGGTTTCTAAATTCTTCTGTTTGATCATTCTCTCTTCTGCATTCCTTTGCCTTTCCTATGAACCTCGGAACCCAGAAGTCGAAGCTCTGATTAATGTCAAGATGGCATTGAATGATCCCCACGCTGTTCTCAGCAATTGGGATGAGGACTCTGTGGACCCTTGCAGTTGGGCAATGATCACCTGCTCCCCTGAGAATCTCGTTATAGGACTAGGTGCTCCGAGCCAGTCTCTTTCCGGAAGCTTGTCTGGGGCGATTAGGAACCTCACAAATCTTCGCCAAGTGCTGCTGCAGAACAACAACATTTCTGGTCCAATTCCCATTGAACTTGGAACTCTCCCATTGCTTCAAACATTAGATCTCTCAAACAATCGTTTCTCTGGACCAATACCAGCATCTTTTGGTCAGCTGAACAATCTACGCTACCTGAGGGTGAACAATAATAGCTTGTCCGGGCCTTTTCCCTTGTCTTTGGCCAAAATCCCCCAGCTTGCTTTCTTGGACTTGTCTTTTAACAATCTCAGTGGCCCAGTGCCTGTTTTCCCAGCCAGAACATTCAATGTGGTGGGAAATCCAATGATTTGTGGAAGTAGTCCTAATGAAGGTTGCTCTTCCTCAGCCAATGCCGTTCCTCTTTCTTTCTCTCTAGAATCCTCCCCTGGAAGACTCAGGTCCAAAAGAATAGCAGTGGCACTTGGGGTCAGCCTCAGCTGTGCTTTTCTGATGCTCCTAGCACTTGGAATTCTTTGGCGCAGAAAAACTCTCAAGACCAAAACCATCCTAGACATCAATGTTGGGAATCAAGAAGTTGGACTAGTGCGGCTAGGGAACCTGAGGAACTTCAGTTTCAAAGAGCTGCAGTTAGCAACAGACCATTTTAGTTCAAAACATATACTTGGGGCTGGAGGGTTTGGAAATGTGTACAAGGGAAAGCTAGGAAATGGGAGTATGGTGGCAGTGAAACGGCTAAAAGATGTAACGGGCAGCACTGGAGAGTCACAGTTCCGCACAGAGTTGGAGATGATTAGCCTTGCAGTTCATCGCAATTTGCTTAGGTTGATTGGTTATTGTGCCACTTCTCACGAGAGGCTCTTGGTGTACCCATACATGTCAAATGGCAGTGTAGCTTCCAGGCTCAGAGGAAAACCAGCCCTGGACTGGAACACAAGGAAGAGAATAGCAATTGGCGCTGCAAGGGGTCTGCTGTACCTACACGAGCAATGTGATCCTAAGATAATCCATAGAGATGTGAAGGCTGCCAATGTGCTTCTAGATGACTACTGCGAAGCTGTAGTTGGTGATTTTGGACTTGCAAAGCTTCTTGACCATGCTGACTCTCATGTCACCACTGCTGTTCGTGGCACTGTTGGCCACATCGCTCCGGAGTATCTTTCGACTGGCCAATCTTCTGAGAAGACTGATGTGTTTGGGTTTGGCATTCTTTTGATAGAGCTAATAACTGGAATGAGAGCTCTTGAATTTGGGAAAACAATTAACCAGAAAGGCGCCATGCTTGAGTGGGTGAAAAAGATACAACAGGAAAAGAAAGTGGAATTGCTTGTGGACAGAGAGCTAGGCAACAATTATGATCAGATTGAAGTTGGGGAAATGTTGCAAGTGGCTCTTCTTTGCACTCAGTATTTACCTGCTCACCGTCCCAAGATGTCGGAGGTGGTCCGAATGCTCGAAGGGGATGGCCTTGTTGAGAAATGGGCAGCATCCCACACTCATGATGACTTAAATGTCAACCTTTTTCATTCACGGAACAGCTGCAAAAGTACATACAACAACCCCACAAACACATTGAAGAATAATGGCAATGATCGAGATCATTCAAGCATGTTAAGTTTAACAATGGACGATGATGATGACGAGCGATCTTTAGACTCCTATGCCATGGAACTCTCCGGTCCAAGATAG | 1920 | 46.09 | MVSKFFCLIILSSAFLCLSYEPRNPEVEALINVKMALNDPHAVLSNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGSLSGAIRNLTNLRQVLLQNNNISGPIPIELGTLPLLQTLDLSNNRFSGPIPASFGQLNNLRYLRVNNNSLSGPFPLSLAKIPQLAFLDLSFNNLSGPVPVFPARTFNVVGNPMICGSSPNEGCSSSANAVPLSFSLESSPGRLRSKRIAVALGVSLSCAFLMLLALGILWRRKTLKTKTILDINVGNQEVGLVRLGNLRNFSFKELQLATDHFSSKHILGAGGFGNVYKGKLGNGSMVAVKRLKDVTGSTGESQFRTELEMISLAVHRNLLRLIGYCATSHERLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLIELITGMRALEFGKTINQKGAMLEWVKKIQQEKKVELLVDRELGNNYDQIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLVEKWAASHTHDDLNVNLFHSRNSCKSTYNNPTNTLKNNGNDRDHSSMLSLTMDDDDDERSLDSYAMELSGPR | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5108216 | 5112752 | - | Hsped.09g05420.1 | Hepe09g0542 | 579226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0542 | 639 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 6 | 639 | - | - | |
Hepe09g0542 | 639 | FunFam | Somatic embryogenesis receptor kinase 1 | 262 | 369 | - | - | |
Hepe09g0542 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 273 | 563 | IPR011009 | - | |
Hepe09g0542 | 639 | MobiDBLite | consensus disorder prediction | 593 | 639 | - | - | |
Hepe09g0542 | 639 | Pfam | Leucine rich repeat N-terminal domain | 24 | 63 | IPR013210 | - | |
Hepe09g0542 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 370 | 581 | - | - | |
Hepe09g0542 | 639 | SUPERFAMILY | L domain-like | 24 | 188 | - | - | |
Hepe09g0542 | 639 | SMART | serkin_6 | 293 | 562 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe09g0542 | 639 | Gene3D | Ribonuclease Inhibitor | 23 | 205 | IPR032675 | - | |
Hepe09g0542 | 639 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 23 | 205 | - | - | |
Hepe09g0542 | 639 | ProSitePatterns | Protein kinases ATP-binding region signature. | 299 | 321 | IPR017441 | GO:0005524(InterPro) | |
Hepe09g0542 | 639 | Pfam | Leucine Rich Repeat | 91 | 113 | IPR001611 | GO:0005515(InterPro) | |
Hepe09g0542 | 639 | MobiDBLite | consensus disorder prediction | 593 | 613 | - | - | |
Hepe09g0542 | 639 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 412 | 424 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe09g0542 | 639 | Pfam | Protein tyrosine and serine/threonine kinase | 296 | 562 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe09g0542 | 639 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 370 | 582 | - | - | |
Hepe09g0542 | 639 | ProSiteProfiles | Protein kinase domain profile. | 293 | 568 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe09g0542 | 639 | Pfam | Leucine rich repeat | 115 | 174 | IPR001611 | GO:0005515(InterPro) | |
Hepe09g0542 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 263 | 369 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe09g0542 | Hepe-Chr9:5108216 | Hepe10g0030 | Hepe-Chr10:283159 | 3.53e-197 | dispersed | |
Hepe09g0542 | Hepe-Chr9:5108216 | Hepe02g3235 | Hepe-Chr2:81933331 | 7.53e-219 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73119 | PF07714 | PK_Tyr_Ser-Thr | 1.90E-42 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0542 | - | - | - | 0.0 |